2qa1: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2qa1.png|left|200px]]


<!--
==Crystal structure of PgaE, an aromatic hydroxylase involved in angucycline biosynthesis==
The line below this paragraph, containing "STRUCTURE_2qa1", creates the "Structure Box" on the page.
<StructureSection load='2qa1' size='340' side='right'caption='[[2qa1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qa1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_sp._PGA64 Streptomyces sp. PGA64]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QA1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QA1 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2qa1|  PDB=2qa1  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qa1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qa1 OCA], [https://pdbe.org/2qa1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qa1 RCSB], [https://www.ebi.ac.uk/pdbsum/2qa1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qa1 ProSAT]</span></td></tr>
 
</table>
===Crystal structure of PgaE, an aromatic hydroxylase involved in angucycline biosynthesis===
== Function ==
 
[https://www.uniprot.org/uniprot/Q93LY7_9ACTN Q93LY7_9ACTN]  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_17669423}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 17669423 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qa/2qa1_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_17669423}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2QA1 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Streptomyces_sp._pga64 Streptomyces sp. pga64]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QA1 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qa1 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:17669423</ref><references group="xtra"/>
</StructureSection>
[[Category: Streptomyces sp. pga64]]
[[Category: Large Structures]]
[[Category: Dobritzsch, D.]]
[[Category: Streptomyces sp. PGA64]]
[[Category: Kallio, P.]]
[[Category: Dobritzsch D]]
[[Category: Koskiniemi, H.]]
[[Category: Kallio P]]
[[Category: Metsa-Ketela, M.]]
[[Category: Koskiniemi H]]
[[Category: Niemi, J.]]
[[Category: Metsa-Ketela M]]
[[Category: Schneider, G.]]
[[Category: Niemi J]]
[[Category: Angucycline]]
[[Category: Schneider G]]
[[Category: Aromatic hydroxylase]]
[[Category: Fad]]
[[Category: Oxidoreductase]]
[[Category: Polyketide]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 15:09:33 2009''

Latest revision as of 09:14, 21 February 2024

Crystal structure of PgaE, an aromatic hydroxylase involved in angucycline biosynthesis

2qa1, resolution 1.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA