2rfg: Difference between revisions

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{{Seed}}
[[Image:2rfg.png|left|200px]]


<!--
==Crystal structure of dihydrodipicolinate synthase from Hahella chejuensis at 1.5A resolution==
The line below this paragraph, containing "STRUCTURE_2rfg", creates the "Structure Box" on the page.
<StructureSection load='2rfg' size='340' side='right'caption='[[2rfg]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2rfg]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Hahella_chejuensis Hahella chejuensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RFG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RFG FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_2rfg| PDB=2rfg |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rfg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rfg OCA], [https://pdbe.org/2rfg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rfg RCSB], [https://www.ebi.ac.uk/pdbsum/2rfg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rfg ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q2S9K4_HAHCH Q2S9K4_HAHCH] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[HAMAP-Rule:MF_00418][SAAS:SAAS00086388]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rf/2rfg_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rfg ConSurf].
<div style="clear:both"></div>


===Crystal structure of dihydrodipicolinate synthase from Hahella chejuensis at 1.5A resolution===
==See Also==
 
*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
 
__TOC__
==About this Structure==
</StructureSection>
2RFG is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Hahella_chejuensis Hahella chejuensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RFG OCA].
[[Category: Dihydrodipicolinate synthase]]
[[Category: Hahella chejuensis]]
[[Category: Hahella chejuensis]]
[[Category: Kang, B S.]]
[[Category: Large Structures]]
[[Category: Kim, G H.]]
[[Category: Kang BS]]
[[Category: Kim, K J.]]
[[Category: Kim GH]]
[[Category: Kim, M H.]]
[[Category: Kim KJ]]
[[Category: Amino-acid biosynthesis]]
[[Category: Kim MH]]
[[Category: Beta barrel]]
[[Category: Cytoplasm]]
[[Category: Diaminopimelate biosynthesis]]
[[Category: Lyase]]
[[Category: Lysine biosynthesis]]
[[Category: Schiff base]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 16:23:00 2009''
Retrieved from "https://proteopedia.org/2rfg"