2d63: Difference between revisions

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{{Seed}}
[[Image:2d63.png|left|200px]]


<!--
==Aspartate Aminotransferase Mutant MA With Isovaleric Acid==
The line below this paragraph, containing "STRUCTURE_2d63", creates the "Structure Box" on the page.
<StructureSection load='2d63' size='340' side='right'caption='[[2d63]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2d63]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D63 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IVA:ISOVALERIC+ACID'>IVA</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
{{STRUCTURE_2d63|  PDB=2d63 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d63 OCA], [https://pdbe.org/2d63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d63 RCSB], [https://www.ebi.ac.uk/pdbsum/2d63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d63 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/AAT_ECOLI AAT_ECOLI]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d6/2d63_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d63 ConSurf].
<div style="clear:both"></div>


===Aspartate Aminotransferase Mutant MA With Isovaleric Acid===
==See Also==
 
*[[Aspartate aminotransferase 3D structures|Aspartate aminotransferase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2D63 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D63 OCA].
[[Category: Aspartate transaminase]]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Kuramitsu, S.]]
[[Category: Large Structures]]
[[Category: Masui, R.]]
[[Category: Kuramitsu S]]
[[Category: Nakagawa, N.]]
[[Category: Masui R]]
[[Category: Tada, H.]]
[[Category: Nakagawa N]]
[[Category: Tanaka, Y.]]
[[Category: Tada H]]
[[Category: Yano, T.]]
[[Category: Tanaka Y]]
[[Category: Aspartate aminotransferase]]
[[Category: Yano T]]
[[Category: Directed evolution]]
[[Category: Protein design]]
[[Category: Protein enginnering]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 18:06:30 2009''

Latest revision as of 11:34, 22 May 2024

Aspartate Aminotransferase Mutant MA With Isovaleric Acid

2d63, resolution 2.05Å

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