1nmp: Difference between revisions

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{{Seed}}
[[Image:1nmp.png|left|200px]]


<!--
==Structural genomics, ybgI protein, unknown function==
The line below this paragraph, containing "STRUCTURE_1nmp", creates the "Structure Box" on the page.
<StructureSection load='1nmp' size='340' side='right'caption='[[1nmp]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1nmp]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Escherichia_coli_O157:H7 Escherichia coli O157:H7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NMP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NMP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_1nmp|  PDB=1nmp  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nmp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nmp OCA], [https://pdbe.org/1nmp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nmp RCSB], [https://www.ebi.ac.uk/pdbsum/1nmp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nmp ProSAT]</span></td></tr>
 
</table>
===Structural genomics, ybgI protein, unknown function===
== Function ==
 
[https://www.uniprot.org/uniprot/GCH1L_ECOLI GCH1L_ECOLI] Provides significant protection from radiation damage and may be involved in the degradation of radiation-damaged nucleotides.<ref>PMID:25049088</ref>
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_14519207}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 14519207 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nm/1nmp_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_14519207}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1NMP is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli,_and_escherichia_coli_o157:h7 Escherichia coli, and escherichia coli o157:h7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NMP OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nmp ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
<ref group="xtra">PMID:14519207</ref><references group="xtra"/>
<references/>
[[Category: Escherichia coli, and escherichia coli o157:h7]]
__TOC__
[[Category: Camerini-Otero, R D.]]
</StructureSection>
[[Category: Gilliland, G L.]]
[[Category: Escherichia coli]]
[[Category: Khil, P P.]]
[[Category: Escherichia coli O157:H7]]
[[Category: Ladner, J E.]]
[[Category: Large Structures]]
[[Category: Obmolova, G.]]
[[Category: Camerini-Otero RD]]
[[Category: S2F, Structure 2.Function Project.]]
[[Category: Gilliland GL]]
[[Category: Teplyakov, A.]]
[[Category: Khil PP]]
[[Category: Hypothetical protein]]
[[Category: Ladner JE]]
[[Category: S2f]]
[[Category: Obmolova G]]
[[Category: Structural genomic]]
[[Category: Teplyakov A]]
[[Category: Structure 2 function project]]
[[Category: Toroidal structure]]
[[Category: Ybgi]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 18:16:36 2009''

Latest revision as of 07:57, 14 February 2024

Structural genomics, ybgI protein, unknown function

1nmp, resolution 2.20Å

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