2b99: Difference between revisions

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{{Seed}}
[[Image:2b99.png|left|200px]]


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==Crystal Structure of an archaeal pentameric riboflavin synthase Complex with a Substrate analog inhibitor==
The line below this paragraph, containing "STRUCTURE_2b99", creates the "Structure Box" on the page.
<StructureSection load='2b99' size='340' side='right'caption='[[2b99]], [[Resolution|resolution]] 2.22&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2b99]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B99 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B99 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.22&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RDL:6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE'>RDL</scene></td></tr>
{{STRUCTURE_2b99|  PDB=2b99  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b99 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b99 OCA], [https://pdbe.org/2b99 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b99 RCSB], [https://www.ebi.ac.uk/pdbsum/2b99 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b99 ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of an archaeal pentameric riboflavin synthase Complex with a Substrate analog inhibitor===
== Function ==
 
[https://www.uniprot.org/uniprot/RISC_METJA RISC_METJA]
 
== Evolutionary Conservation ==
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b9/2b99_consurf.spt"</scriptWhenChecked>
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2B99 is a 5 chains structure of sequences from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B99 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b99 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:16272154</ref><references group="xtra"/>
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Riboflavin synthase]]
[[Category: Augustin M]]
[[Category: Augustin, M.]]
[[Category: Bacher A]]
[[Category: Bacher, A.]]
[[Category: Cushman M]]
[[Category: Cushman, M.]]
[[Category: Eisenreich W]]
[[Category: Eisenreich, W.]]
[[Category: Fischer M]]
[[Category: Fischer, M.]]
[[Category: Gerhardt S]]
[[Category: Gerhardt, S.]]
[[Category: Huber R]]
[[Category: Huber, R.]]
[[Category: Illarionov B]]
[[Category: Illarionov, B.]]
[[Category: Krojer T]]
[[Category: Krojer, T.]]
[[Category: Ramsperger A]]
[[Category: Ramsperger, A.]]
[[Category: Schott AK]]
[[Category: Schott, A K.]]
[[Category: Lumazine riboflavin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 19:51:54 2009''