2fl8: Difference between revisions

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New page: left|200px<br /><applet load="2fl8" size="450" color="white" frame="true" align="right" spinBox="true" caption="2fl8" /> '''Fitting of the gp10 trimer structure into th...
 
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[[Image:2fl8.gif|left|200px]]<br /><applet load="2fl8" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2fl8" />
'''Fitting of the gp10 trimer structure into the cryoEM map of the bacteriophage T4 baseplate in the hexagonal conformation.'''<br />


==Overview==
==Fitting of the gp10 trimer structure into the cryoEM map of the bacteriophage T4 baseplate in the hexagonal conformation.==
The success of tailed bacteriophages to infect cells far exceeds that of, most other viruses on account of their specialized tail and associated, baseplate structures. The baseplate protein gene product (gp) 10 of, bacteriophage T4, whose structure was determined to 1.2 A resolution, was, fitted into the cryo-electron microscopy structures of the pre and, post-infection conformations of the virus. gp10 functions as a molecular, lever that rotates and extends the hinged short tail fibers to facilitate, cell attachment. The central folding motif of the gp10 trimer is similar, to that of the baseplate protein gp11 and to the receptor-binding domain, of the short tail fiber, gp12. The three proteins comprise the periphery, of the baseplate and interact with each other. The structural and, functional similarities of gp10, gp11, and gp12 and their sequential order, in the T4 genome suggest that they evolved separately, subsequent to gene, triplication from a common ancestor. Such events are usual in the, evolution of complex organelles from a common primordial molecule.
<SX load='2fl8' size='340' side='right' viewer='molstar' caption='[[2fl8]], [[Resolution|resolution]] 12.00&Aring;' scene=''>
 
== Structural highlights ==
==About this Structure==
<table><tr><td colspan='2'>[[2fl8]] is a 18 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FL8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FL8 FirstGlance]. <br>
2FL8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteriophage_t4 Bacteriophage t4]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2FL8 OCA].  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 12&#8491;</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fl8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fl8 OCA], [https://pdbe.org/2fl8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fl8 RCSB], [https://www.ebi.ac.uk/pdbsum/2fl8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fl8 ProSAT]</span></td></tr>
==Reference==
</table>
Evolution of bacteriophage tails: Structure of T4 gene product 10., Leiman PG, Shneider MM, Mesyanzhinov VV, Rossmann MG, J Mol Biol. 2006 May 5;358(3):912-21. Epub 2006 Mar 9. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16554069 16554069]
== Function ==
[[Category: Bacteriophage t4]]
[https://www.uniprot.org/uniprot/BP10_BPT4 BP10_BPT4] Baseplate protein that is part of the baseplate wedge and that connects the short tail fibers to the baseplate (PubMed:16554069). During infection, the baseplate undergoes a conformational change from a dome-shaped to a star-shaped structure. At this point, gp10 rotates and acts as a lever that unfolds the short tail fibers, which then interact with host cell surface receptors. Involved in the tail assembly.<ref>PMID:16554069</ref> <ref>PMID:21129200</ref>
[[Category: Single protein]]
== Evolutionary Conservation ==
[[Category: Leiman, P.G.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Mesyanzhinov, V.V.]]
Check<jmol>
[[Category: Rossmann, M.G.]]
  <jmolCheckbox>
[[Category: Shneider, M.M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fl/2fl8_consurf.spt"</scriptWhenChecked>
[[Category: bacteriophage t4; baseplate; tail; evolution; gp10; structural comparisons]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 10:36:56 2007''
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fl8 ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</SX>
[[Category: Escherichia virus T4]]
[[Category: Large Structures]]
[[Category: Leiman PG]]
[[Category: Mesyanzhinov VV]]
[[Category: Rossmann MG]]
[[Category: Shneider MM]]

Latest revision as of 09:24, 14 February 2024

Fitting of the gp10 trimer structure into the cryoEM map of the bacteriophage T4 baseplate in the hexagonal conformation.

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