1m7j: Difference between revisions

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{{Seed}}
[[Image:1m7j.png|left|200px]]


<!--
==Crystal structure of D-aminoacylase defines a novel subset of amidohydrolases==
The line below this paragraph, containing "STRUCTURE_1m7j", creates the "Structure Box" on the page.
<StructureSection load='1m7j' size='340' side='right'caption='[[1m7j]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1m7j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M7J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M7J FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1m7j|  PDB=1m7j |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m7j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m7j OCA], [https://pdbe.org/1m7j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m7j RCSB], [https://www.ebi.ac.uk/pdbsum/1m7j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m7j ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9AGH8_ALCFA Q9AGH8_ALCFA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m7/1m7j_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m7j ConSurf].
<div style="clear:both"></div>


===Crystal structure of D-aminoacylase defines a novel subset of amidohydrolases===
==See Also==
 
*[[Aminoacylase 3D structures|Aminoacylase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_12454005}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 12454005 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_12454005}}
 
==About this Structure==
1M7J is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Alcaligenes_faecalis Alcaligenes faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M7J OCA].
 
==Reference==
<ref group="xtra">PMID:12454005</ref><references group="xtra"/>
[[Category: Alcaligenes faecalis]]
[[Category: Alcaligenes faecalis]]
[[Category: N-acyl-D-amino-acid deacylase]]
[[Category: Large Structures]]
[[Category: Chen, S J.]]
[[Category: Chen S-J]]
[[Category: Hsu, C S.]]
[[Category: Hsu C-S]]
[[Category: Ko, T P.]]
[[Category: Ko T-P]]
[[Category: Liaw, S H.]]
[[Category: Liaw S-H]]
[[Category: Tsai, Y C.]]
[[Category: Tsai Y-C]]
[[Category: Wang, A H.J.]]
[[Category: Wang AH-J]]
[[Category: Metal-dependent amidohydrolase]]
[[Category: Tin-barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 20:40:12 2009''

Latest revision as of 13:26, 13 March 2024

Crystal structure of D-aminoacylase defines a novel subset of amidohydrolases

1m7j, resolution 1.50Å

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