2g5l: Difference between revisions
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New page: left|200px<br /><applet load="2g5l" size="450" color="white" frame="true" align="right" spinBox="true" caption="2g5l, resolution 1.15Å" /> '''Streptavidin in comp... |
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== | ==Streptavidin in complex with Nanotag== | ||
<StructureSection load='2g5l' size='340' side='right'caption='[[2g5l]], [[Resolution|resolution]] 1.15Å' scene=''> | |||
[[Category: | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2g5l]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G5L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G5L FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.15Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g5l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g5l OCA], [https://pdbe.org/2g5l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g5l RCSB], [https://www.ebi.ac.uk/pdbsum/2g5l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g5l ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin). | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g5/2g5l_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g5l ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Avidin 3D structures|Avidin 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Streptomyces avidinii]] | [[Category: Streptomyces avidinii]] | ||
[[Category: Betzel | [[Category: Betzel C]] | ||
[[Category: Bruns | [[Category: Bruns O]] | ||
[[Category: Erdmann | [[Category: Erdmann VA]] | ||
[[Category: Lamla | [[Category: Lamla T]] | ||
[[Category: Perbandt | [[Category: Perbandt M]] | ||
[[Category: Vallazza | [[Category: Vallazza M]] | ||
Latest revision as of 07:54, 23 October 2024
Streptavidin in complex with Nanotag
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