3dl2: Difference between revisions

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{{Seed}}
[[Image:3dl2.png|left|200px]]


<!--
==Hexagonal structure of the LDH domain of Human Ubiquitin-conjugating Enzyme E2-like Isoform A==
The line below this paragraph, containing "STRUCTURE_3dl2", creates the "Structure Box" on the page.
<StructureSection load='3dl2' size='340' side='right'caption='[[3dl2]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dl2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DL2 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_3dl2|  PDB=3dl2  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dl2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dl2 OCA], [https://pdbe.org/3dl2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dl2 RCSB], [https://www.ebi.ac.uk/pdbsum/3dl2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dl2 ProSAT]</span></td></tr>
 
</table>
===Hexagonal structure of the LDH domain of Human Ubiquitin-conjugating Enzyme E2-like Isoform A===
== Function ==
 
[https://www.uniprot.org/uniprot/UEVLD_HUMAN UEVLD_HUMAN] Possible negative regulator of polyubiquitination.<ref>PMID:12427560</ref>  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3DL2 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DL2 OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dl/3dl2_consurf.spt"</scriptWhenChecked>
<ref group="xtra">PMID:12427560</ref><references group="xtra"/>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dl2 ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Arrowsmith, C H.]]
[[Category: Large Structures]]
[[Category: Avvakumov, G V.]]
[[Category: Arrowsmith CH]]
[[Category: Bochkarev, A.]]
[[Category: Avvakumov GV]]
[[Category: Bountra, C.]]
[[Category: Bochkarev A]]
[[Category: Butler-Cole, C.]]
[[Category: Bountra C]]
[[Category: Dhe-Paganon, S.]]
[[Category: Butler-Cole C]]
[[Category: Edwards, A M.]]
[[Category: Dhe-Paganon S]]
[[Category: Jr., P J.Finerty.]]
[[Category: Edwards AM]]
[[Category: Newman, E M.]]
[[Category: Finerty Jr PJ]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Newman EM]]
[[Category: Walker, J R.]]
[[Category: Walker JR]]
[[Category: Wolkstrom, M.]]
[[Category: Wolkstrom M]]
[[Category: Xue, S.]]
[[Category: Xue S]]
[[Category: Alternative splicing]]
[[Category: L-lactate dehydrogenase]]
[[Category: Nad]]
[[Category: Oxidoreductase]]
[[Category: Sgc]]
[[Category: Structural genomic]]
[[Category: Structural genomics consortium]]
[[Category: Ubiquitin-protein ligase]]
[[Category: Ubl conjugation pathway]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 23:31:52 2009''
Retrieved from "https://proteopedia.org/3dl2"