1dkd: Difference between revisions

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{{Seed}}
[[Image:1dkd.png|left|200px]]


<!--
==CRYSTAL STRUCTURE OF A GROEL (APICAL DOMAIN) AND A DODECAMERIC PEPTIDE COMPLEX==
The line below this paragraph, containing "STRUCTURE_1dkd", creates the "Structure Box" on the page.
<StructureSection load='1dkd' size='340' side='right'caption='[[1dkd]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1dkd]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DKD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DKD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dkd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dkd OCA], [https://pdbe.org/1dkd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dkd RCSB], [https://www.ebi.ac.uk/pdbsum/1dkd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dkd ProSAT]</span></td></tr>
{{STRUCTURE_1dkd| PDB=1dkd |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/CH60_ECOLI CH60_ECOLI] Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.[HAMAP-Rule:MF_00600]  Essential for the growth of the bacteria and the assembly of several bacteriophages. Also plays a role in coupling between replication of the F plasmid and cell division of the cell.[HAMAP-Rule:MF_00600]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dk/1dkd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dkd ConSurf].
<div style="clear:both"></div>


===CRYSTAL STRUCTURE OF A GROEL (APICAL DOMAIN) AND A DODECAMERIC PEPTIDE COMPLEX===
==See Also==
 
*[[Heat Shock Protein structures|Heat Shock Protein structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_10619429}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 10619429 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_10619429}}
 
==About this Structure==
1DKD is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DKD OCA].
 
==Reference==
<ref group="xtra">PMID:10619429</ref><references group="xtra"/>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Chen, L.]]
[[Category: Large Structures]]
[[Category: Sigler, P B.]]
[[Category: Chen L]]
[[Category: Hsp60]]
[[Category: Sigler PB]]
[[Category: Molecular chaperon]]
[[Category: Peptide binding groove formed by paired helices substrate peptide in beta-sheet]]
[[Category: Peptide selection]]
[[Category: Phage display]]
[[Category: Protein folding]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:06:03 2009''

Latest revision as of 06:55, 7 February 2024

CRYSTAL STRUCTURE OF A GROEL (APICAL DOMAIN) AND A DODECAMERIC PEPTIDE COMPLEX

1dkd, resolution 2.10Å

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