1si7: Difference between revisions

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{{Seed}}
[[Image:1si7.png|left|200px]]


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==Structure of E. coli tRNA psi 13 pseudouridine synthase TruD==
The line below this paragraph, containing "STRUCTURE_1si7", creates the "Structure Box" on the page.
<StructureSection load='1si7' size='340' side='right'caption='[[1si7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1si7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SI7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SI7 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1si7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1si7 OCA], [https://pdbe.org/1si7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1si7 RCSB], [https://www.ebi.ac.uk/pdbsum/1si7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1si7 ProSAT]</span></td></tr>
{{STRUCTURE_1si7| PDB=1si7 |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/TRUD_ECOLI TRUD_ECOLI] Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.<ref>PMID:12756329</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/si/1si7_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1si7 ConSurf].
<div style="clear:both"></div>


===Structure of E. coli tRNA psi 13 pseudouridine synthase TruD===
==See Also==
 
*[[Guide-independent Pseudouridine synthase|Guide-independent Pseudouridine synthase]]
 
*[[Pseudouridine synthase 3D structures|Pseudouridine synthase 3D structures]]
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== References ==
The line below this paragraph, {{ABSTRACT_PUBMED_14999002}}, adds the Publication Abstract to the page
<references/>
(as it appears on PubMed at http://www.pubmed.gov), where 14999002 is the PubMed ID number.
__TOC__
-->
</StructureSection>
{{ABSTRACT_PUBMED_14999002}}
 
==About this Structure==
1SI7 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SI7 OCA].
 
==Reference==
<ref group="xtra">PMID:14999002</ref><references group="xtra"/>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Pseudouridylate synthase]]
[[Category: Large Structures]]
[[Category: Campo, M Del.]]
[[Category: Del Campo M]]
[[Category: Kaya, Y.]]
[[Category: Kaya Y]]
[[Category: Malhotra, A.]]
[[Category: Malhotra A]]
[[Category: Ofengand, J.]]
[[Category: Ofengand J]]
[[Category: Novel fold]]
[[Category: Pseudouridine synthase]]
[[Category: Trna]]
[[Category: Trud]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 01:16:13 2009''
Retrieved from "https://proteopedia.org/1si7"