2gta: Difference between revisions

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New page: left|200px<br /><applet load="2gta" size="450" color="white" frame="true" align="right" spinBox="true" caption="2gta, resolution 2.90Å" /> '''Crystal Structure of...
 
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[[Image:2gta.gif|left|200px]]<br /><applet load="2gta" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2gta, resolution 2.90&Aring;" />
'''Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.'''<br />


==About this Structure==
==Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.==
2GTA is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with NA as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2GTA OCA].  
<StructureSection load='2gta' size='340' side='right'caption='[[2gta]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2gta]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GTA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GTA FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gta OCA], [https://pdbe.org/2gta PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gta RCSB], [https://www.ebi.ac.uk/pdbsum/2gta PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gta ProSAT], [https://www.topsan.org/Proteins/NESGC/2gta TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YPJD_BACSU YPJD_BACSU]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gt/2gta_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gta ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Acton, T.]]
[[Category: Acton T]]
[[Category: Hunt, J.F.]]
[[Category: Hunt JF]]
[[Category: Ma, L.C.]]
[[Category: Ma LC]]
[[Category: Montelione, G.T.]]
[[Category: Montelione GT]]
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
[[Category: Seetharaman J]]
[[Category: Seetharaman, J.]]
[[Category: Tong L]]
[[Category: Tong, L.]]
[[Category: Vorobiev SM]]
[[Category: Vorobiev, S.M.]]
[[Category: Wang D]]
[[Category: Wang, D.]]
[[Category: Xio R]]
[[Category: Xio, R.]]
[[Category: Zhou W]]
[[Category: Zhou, W.]]
[[Category: NA]]
[[Category: nesg]]
[[Category: northeast structural genomics consortium]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: pyrophosphatase]]
[[Category: structural genomics]]
[[Category: ypjd]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 11:22:40 2007''
Retrieved from "https://proteopedia.org/2gta"