2gu3: Difference between revisions

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New page: left|200px<br /><applet load="2gu3" size="450" color="white" frame="true" align="right" spinBox="true" caption="2gu3, resolution 1.74Å" /> '''YpmB protein from Ba...
 
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[[Image:2gu3.gif|left|200px]]<br /><applet load="2gu3" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2gu3, resolution 1.74&Aring;" />
'''YpmB protein from Bacillus subtilis'''<br />


==About this Structure==
==YpmB protein from Bacillus subtilis==
2GU3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with NI as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2GU3 OCA].  
<StructureSection load='2gu3' size='340' side='right'caption='[[2gu3]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
[[Category: Bacillus subtilis]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2gu3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GU3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GU3 FirstGlance]. <br>
[[Category: Dementieva, I.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
[[Category: Joachimiak, A.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gu3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gu3 OCA], [https://pdbe.org/2gu3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gu3 RCSB], [https://www.ebi.ac.uk/pdbsum/2gu3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gu3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2gu3 TOPSAN]</span></td></tr>
[[Category: Maltseva, N.]]
</table>
[[Category: Moy, S.]]
== Function ==
[[Category: Osipiuk, J.]]
[https://www.uniprot.org/uniprot/YPMB_BACSU YPMB_BACSU]  
[[Category: NI]]
== Evolutionary Conservation ==
[[Category: apc1927]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: mcsg]]
Check<jmol>
[[Category: midwest center for structural genomics]]
  <jmolCheckbox>
[[Category: protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/2gu3_consurf.spt"</scriptWhenChecked>
[[Category: psi]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 11:23:30 2007''
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gu3 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Large Structures]]
[[Category: Dementieva I]]
[[Category: Joachimiak A]]
[[Category: Maltseva N]]
[[Category: Moy S]]
[[Category: Osipiuk J]]

Latest revision as of 09:29, 14 February 2024

YpmB protein from Bacillus subtilis

2gu3, resolution 1.74Å

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