1ups: Difference between revisions

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{{Seed}}
[[Image:1ups.png|left|200px]]


<!--
==GlcNAc[alpha]1-4Gal releasing endo-[beta]-galactosidase from Clostridium perfringens==
The line below this paragraph, containing "STRUCTURE_1ups", creates the "Structure Box" on the page.
<StructureSection load='1ups' size='340' side='right'caption='[[1ups]], [[Resolution|resolution]] 1.82&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1ups]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UPS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UPS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.82&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_1ups| PDB=1ups |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ups FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ups OCA], [https://pdbe.org/1ups PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ups RCSB], [https://www.ebi.ac.uk/pdbsum/1ups PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ups ProSAT], [https://www.topsan.org/Proteins/SECSG/1ups TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q934G8_CLOPF Q934G8_CLOPF]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/up/1ups_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ups ConSurf].
<div style="clear:both"></div>


===GLCNAC[ALPHA]1-4GAL RELEASING ENDO-[BETA]-GALACTOSIDASE FROM CLOSTRIDIUM PERFRINGENS===
==See Also==
 
*[[Galactosidase 3D structures|Galactosidase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
1UPS is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UPS OCA].
 
==Reference==
<ref group="xtra">PMID:15688452</ref><references group="xtra"/>
[[Category: Clostridium perfringens]]
[[Category: Clostridium perfringens]]
[[Category: Ashida, H.]]
[[Category: Large Structures]]
[[Category: Deng, L.]]
[[Category: Ashida H]]
[[Category: Horanyi, P S.]]
[[Category: Deng L]]
[[Category: Lee, D.]]
[[Category: Horanyi PS]]
[[Category: Li, S C.]]
[[Category: Lee D]]
[[Category: Li, Y T.]]
[[Category: Li S-C]]
[[Category: Liu, Z J.]]
[[Category: Li Y-T]]
[[Category: Newton, M G.]]
[[Category: Liu Z-J]]
[[Category: Rose, J P.]]
[[Category: Newton MG]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Rose JP]]
[[Category: Tempel, W.]]
[[Category: Tempel W]]
[[Category: Wang, B C.]]
[[Category: Wang B-C]]
[[Category: Endo-galactosidase,clostridium perfringens,glycosyl hydrolase,psi,protein structure initiative,southeast collaboratory for structural genomics,secsg]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 04:20:24 2009''
Retrieved from "https://proteopedia.org/1ups"