3e6m: Difference between revisions

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{{Seed}}
[[Image:3e6m.png|left|200px]]


<!--
==The crystal structure of a MarR family transcriptional regulator from Silicibacter pomeroyi DSS.==
The line below this paragraph, containing "STRUCTURE_3e6m", creates the "Structure Box" on the page.
<StructureSection load='3e6m' size='340' side='right'caption='[[3e6m]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3e6m]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_pomeroyi Ruegeria pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E6M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E6M FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3e6m|  PDB=3e6m |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e6m OCA], [https://pdbe.org/3e6m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e6m RCSB], [https://www.ebi.ac.uk/pdbsum/3e6m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e6m ProSAT], [https://www.topsan.org/Proteins/MCSG/3e6m TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5LLB9_RUEPO Q5LLB9_RUEPO]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e6/3e6m_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e6m ConSurf].
<div style="clear:both"></div>


===The crystal structure of a MarR family transcriptional regulator from Silicibacter pomeroyi DSS.===
==See Also==
 
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3E6M is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Silicibacter_pomeroyi Silicibacter pomeroyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E6M OCA].
[[Category: Large Structures]]
[[Category: Silicibacter pomeroyi]]
[[Category: Ruegeria pomeroyi]]
[[Category: Freeman, L.]]
[[Category: Freeman L]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Tan K]]
[[Category: Tan, K.]]
[[Category: Volkart L]]
[[Category: Volkart, L.]]
[[Category: Apc88769]]
[[Category: Dna-binding]]
[[Category: Marr]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Plasmid]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Silicibacter pomeroyi dss]]
[[Category: Structural genomic]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:17:35 2009''
Retrieved from "https://proteopedia.org/3e6m"