2vna: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2vna.jpg|left|200px]]


<!--
==Structure of Human Zinc-binding Alcohol Dehydrogenase 1 (ZADH1)==
The line below this paragraph, containing "STRUCTURE_2vna", creates the "Structure Box" on the page.
<StructureSection load='2vna' size='340' side='right'caption='[[2vna]], [[Resolution|resolution]] 2.17&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2vna]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VNA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VNA FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.17&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
{{STRUCTURE_2vna| PDB=2vna |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vna FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vna OCA], [https://pdbe.org/2vna PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vna RCSB], [https://www.ebi.ac.uk/pdbsum/2vna PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vna ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PTGR2_HUMAN PTGR2_HUMAN] Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-keto-PGE1, 15-keto-PGE2, 15-keto-PGE1-alpha and 15-keto-PGE2-alpha with highest activity towards 15-keto-PGE2. Overexpression represses transcriptional activity of PPARG and inhibits adipocyte differentiation (By similarity).<ref>PMID:19000823</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vn/2vna_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vna ConSurf].
<div style="clear:both"></div>


===STRUCTURE OF HUMAN ZINC-BINDING ALCOHOL DEHYDROGENASE 1 (ZADH1)===
==See Also==
 
*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
 
== References ==
==About this Structure==
<references/>
2VNA is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VNA OCA].
__TOC__
[[Category: 15-oxoprostaglandin 13-oxidase]]
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Arrowsmith, C H.]]
[[Category: Large Structures]]
[[Category: Bountra, C.]]
[[Category: Arrowsmith CH]]
[[Category: Delft, F Von.]]
[[Category: Bountra C]]
[[Category: Edwards, A.]]
[[Category: Edwards A]]
[[Category: Fedorov, O.]]
[[Category: Fedorov O]]
[[Category: Johansson, C.]]
[[Category: Johansson C]]
[[Category: Kavanagh, K.]]
[[Category: Kavanagh K]]
[[Category: Kochan, G.]]
[[Category: Kochan G]]
[[Category: Muniz, J R.C.]]
[[Category: Muniz JRC]]
[[Category: Opperman, U.]]
[[Category: Opperman U]]
[[Category: Picaud, S.]]
[[Category: Picaud S]]
[[Category: Pike, A C.W.]]
[[Category: Pike ACW]]
[[Category: Pilka, E.]]
[[Category: Pilka E]]
[[Category: Roos, A K.]]
[[Category: Roos AK]]
[[Category: Shafqat, N.]]
[[Category: Shafqat N]]
[[Category: Smee, C.]]
[[Category: Smee C]]
[[Category: Weigelt, J.]]
[[Category: Weigelt J]]
[[Category: Alternative splicing]]
[[Category: Von Delft F]]
[[Category: Cytoplasm]]
[[Category: Dehydrogenase prostaglandin reductase zinc-binding 5- oxop nadp]]
[[Category: Oxidoreductase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:16:52 2009''

Latest revision as of 15:25, 13 December 2023

Structure of Human Zinc-binding Alcohol Dehydrogenase 1 (ZADH1)

2vna, resolution 2.17Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2vna&oldid=3988028"