3g6s: Difference between revisions

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==Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus. Northeast Structural Genomics Consortium Target BvR56D==
The line below this paragraph, containing "STRUCTURE_3g6s", creates the "Structure Box" on the page.
<StructureSection load='3g6s' size='340' side='right'caption='[[3g6s]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3g6s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phocaeicola_vulgatus_ATCC_8482 Phocaeicola vulgatus ATCC 8482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G6S FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3g6s|  PDB=3g6s  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g6s OCA], [https://pdbe.org/3g6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g6s RCSB], [https://www.ebi.ac.uk/pdbsum/3g6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g6s ProSAT], [https://www.topsan.org/Proteins/NESGC/3g6s TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus. Northeast Structural Genomics Consortium Target BvR56D===
== Function ==
 
[https://www.uniprot.org/uniprot/A6KY15_PHOV8 A6KY15_PHOV8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3G6S is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_vulgatus_atcc_8482 Bacteroides vulgatus atcc 8482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G6S OCA].  
Check<jmol>
[[Category: Bacteroides vulgatus atcc 8482]]
  <jmolCheckbox>
[[Category: Acton, T B.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g6/3g6s_consurf.spt"</scriptWhenChecked>
[[Category: Ciccosanti, C.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Everett, J K.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Foote, E L.]]
  </jmolCheckbox>
[[Category: Forouhar, F.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g6s ConSurf].
[[Category: Hunt, J F.]]
<div style="clear:both"></div>
[[Category: Lew, S.]]
__TOC__
[[Category: Montelione, G T.]]
</StructureSection>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Large Structures]]
[[Category: Nair, R.]]
[[Category: Phocaeicola vulgatus ATCC 8482]]
[[Category: Rost, B]]
[[Category: Acton TB]]
[[Category: Sahdev, S.]]
[[Category: Ciccosanti C]]
[[Category: Seetharaman, J.]]
[[Category: Everett JK]]
[[Category: Tong, L.]]
[[Category: Foote EL]]
[[Category: Wang, D.]]
[[Category: Forouhar F]]
[[Category: Xiao, R.]]
[[Category: Hunt JF]]
[[Category: Alpha-beta protein]]
[[Category: Lew S]]
[[Category: Endonuclease]]
[[Category: Montelione GT]]
[[Category: Endonuclease/exonuclease/phosphatase]]
[[Category: Nair R]]
[[Category: Exonuclease]]
[[Category: Rost B]]
[[Category: Hydrolase]]
[[Category: Sahdev S]]
[[Category: Nesg]]
[[Category: Seetharaman J]]
[[Category: Northeast structural genomics consortium]]
[[Category: Tong L]]
[[Category: Protein structure initiative]]
[[Category: Wang D]]
[[Category: Psi-2]]
[[Category: Xiao R]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:29:16 2009''

Latest revision as of 09:10, 30 October 2024

Crystal structure of the endonuclease/exonuclease/phosphatase (BVU_0621) from Bacteroides vulgatus. Northeast Structural Genomics Consortium Target BvR56D

3g6s, resolution 2.50Å

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