3gem: Difference between revisions

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{{Seed}}
[[Image:3gem.jpg|left|200px]]


<!--
==Crystal structure of short-chain dehydrogenase from Pseudomonas syringae==
The line below this paragraph, containing "STRUCTURE_3gem", creates the "Structure Box" on the page.
<StructureSection load='3gem' size='340' side='right'caption='[[3gem]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3gem]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_savastanoi_pv._phaseolicola_1448A Pseudomonas savastanoi pv. phaseolicola 1448A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GEM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GEM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3gem|  PDB=3gem  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gem OCA], [https://pdbe.org/3gem PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gem RCSB], [https://www.ebi.ac.uk/pdbsum/3gem PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gem ProSAT], [https://www.topsan.org/Proteins/MCSG/3gem TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of short-chain dehydrogenase from Pseudomonas syringae===
== Function ==
 
[https://www.uniprot.org/uniprot/Q48MN0_PSE14 Q48MN0_PSE14]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3GEM is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._phaseolicola_1448a Pseudomonas syringae pv. phaseolicola 1448a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GEM OCA].  
Check<jmol>
[[Category: Pseudomonas syringae pv. phaseolicola 1448a]]
  <jmolCheckbox>
[[Category: Cui, H.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ge/3gem_consurf.spt"</scriptWhenChecked>
[[Category: Edwards, A M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joachimiak, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Nocek, B.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gem ConSurf].
[[Category: Osipiuk, J.]]
<div style="clear:both"></div>
[[Category: Savchenko, A.]]
__TOC__
[[Category: Xu, X.]]
</StructureSection>
[[Category: Apc65077]]
[[Category: Large Structures]]
[[Category: Mcsg]]
[[Category: Pseudomonas savastanoi pv. phaseolicola 1448A]]
[[Category: Midwest center for structural genomic]]
[[Category: Cui H]]
[[Category: Oxidoreductase]]
[[Category: Edwards AM]]
[[Category: Protein structure initiative]]
[[Category: Joachimiak A]]
[[Category: Psi-2]]
[[Category: Nocek B]]
[[Category: Short-chain dehydrogenase]]
[[Category: Osipiuk J]]
[[Category: Structural genomic]]
[[Category: Savchenko A]]
 
[[Category: Xu X]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 11 11:29:08 2009''

Latest revision as of 05:50, 17 October 2024

Crystal structure of short-chain dehydrogenase from Pseudomonas syringae

3gem, resolution 1.83Å

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