3dso: Difference between revisions

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{{Seed}}
[[Image:3dso.png|left|200px]]


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==Crystal structure of Cu(I) bound copper resistance protein CopK==
The line below this paragraph, containing "STRUCTURE_3dso", creates the "Structure Box" on the page.
<StructureSection load='3dso' size='340' side='right'caption='[[3dso]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dso]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_metallidurans_CH34 Cupriavidus metallidurans CH34]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DSO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DSO FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
{{STRUCTURE_3dso|  PDB=3dso  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dso OCA], [https://pdbe.org/3dso PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dso RCSB], [https://www.ebi.ac.uk/pdbsum/3dso PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dso ProSAT]</span></td></tr>
 
</table>
===Crystal structure of Cu(I) bound copper resistance protein CopK===
== Function ==
 
[https://www.uniprot.org/uniprot/COPK_CUPMC COPK_CUPMC] Involved in resistance to copper. Can bind up to 2 copper ions. Has higher affinity for Cu(+) than for Cu(2+).<ref>PMID:18533181</ref>
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ds/3dso_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19236095}}
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3DSO is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Cupriavidus_metallidurans Cupriavidus metallidurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DSO OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dso ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
<ref group="xtra">PMID:19236095</ref><references group="xtra"/>
<references/>
[[Category: Cupriavidus metallidurans]]
__TOC__
[[Category: Ash, M R.]]
</StructureSection>
[[Category: Maher, M J.]]
[[Category: Cupriavidus metallidurans CH34]]
[[Category: Copper resistance]]
[[Category: Large Structures]]
[[Category: Metal binding protein]]
[[Category: Ash M-R]]
[[Category: Periplasm]]
[[Category: Maher MJ]]
[[Category: Plasmid]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 11:28:56 2009''

Latest revision as of 08:24, 20 March 2024

Crystal structure of Cu(I) bound copper resistance protein CopK

3dso, resolution 1.55Å

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