3gne: Difference between revisions
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New page: '''Unreleased structure''' The entry 3gne is ON HOLD Authors: Ogura, K., Yamasaki, M., Hashidume, T., Yamada, T., Mikami, B., Hashimoto, W., Murata, K. Description: Crystal structure o... |
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==Crystal structure of alginate lyase vAL-1 from Chlorella virus== | |||
<StructureSection load='3gne' size='340' side='right'caption='[[3gne]], [[Resolution|resolution]] 1.20Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3gne]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Paramecium_bursaria_Chlorella_virus_CVK2 Paramecium bursaria Chlorella virus CVK2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GNE FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gne FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gne OCA], [https://pdbe.org/3gne PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gne RCSB], [https://www.ebi.ac.uk/pdbsum/3gne PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gne ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q9DTZ2_9PHYC Q9DTZ2_9PHYC] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gne_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gne ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Paramecium bursaria Chlorella virus CVK2]] | |||
[[Category: Hashidume T]] | |||
[[Category: Hashimoto W]] | |||
[[Category: Mikami B]] | |||
[[Category: Murata K]] | |||
[[Category: Ogura K]] | |||
[[Category: Yamada T]] | |||
[[Category: Yamasaki M]] | |||
Latest revision as of 08:26, 20 March 2024
Crystal structure of alginate lyase vAL-1 from Chlorella virus
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