3ees: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3ees.jpg|left|200px]]


<!--
==Structure of the RNA pyrophosphohydrolase BdRppH==
The line below this paragraph, containing "STRUCTURE_3ees", creates the "Structure Box" on the page.
<StructureSection load='3ees' size='340' side='right'caption='[[3ees]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ees]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EES OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EES FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ees FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ees OCA], [https://pdbe.org/3ees PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ees RCSB], [https://www.ebi.ac.uk/pdbsum/3ees PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ees ProSAT]</span></td></tr>
{{STRUCTURE_3ees|  PDB=3ees  |  SCENE=  }}
</table>
 
== Function ==
===Structure of the RNA pyrophosphohydrolase BdRppH===
[https://www.uniprot.org/uniprot/Q6MPX4_BDEBA Q6MPX4_BDEBA]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_19278661}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 19278661 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/3ees_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_19278661}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ees ConSurf].
3EES is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EES OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:19278661</ref><references group="xtra"/>
[[Category: Bdellovibrio bacteriovorus]]
[[Category: Bdellovibrio bacteriovorus]]
[[Category: Amzel, L M.]]
[[Category: Large Structures]]
[[Category: Gabelli, S B.]]
[[Category: Amzel LM]]
[[Category: Messing, S A.]]
[[Category: Gabelli SB]]
[[Category: Hydrolase]]
[[Category: Messing SA]]
[[Category: Nudix]]
[[Category: Rna pyrophosphohydrolase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 12:25:57 2009''
Retrieved from "https://proteopedia.org/3ees"