3gg7: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3gg7.jpg|left|200px]]


<!--
==Crystal structure of an uncharacterized metalloprotein from Deinococcus radiodurans==
The line below this paragraph, containing "STRUCTURE_3gg7", creates the "Structure Box" on the page.
<StructureSection load='3gg7' size='340' side='right'caption='[[3gg7]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3gg7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GG7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GG7 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3gg7|  PDB=3gg7  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gg7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gg7 OCA], [https://pdbe.org/3gg7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gg7 RCSB], [https://www.ebi.ac.uk/pdbsum/3gg7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gg7 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gg7 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of an uncharacterized metalloprotein from Deinococcus radiodurans===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9RZH8_DEIRA Q9RZH8_DEIRA]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3GG7 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GG7 OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/3gg7_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gg7 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Deinococcus radiodurans]]
[[Category: Deinococcus radiodurans]]
[[Category: Almo, S C.]]
[[Category: Large Structures]]
[[Category: Bain, K T.]]
[[Category: Almo SC]]
[[Category: Bonanno, J B.]]
[[Category: Bain KT]]
[[Category: Burley, S K.]]
[[Category: Bonanno JB]]
[[Category: Dickey, M.]]
[[Category: Burley SK]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Dickey M]]
[[Category: Romero, R.]]
[[Category: Romero R]]
[[Category: Sauder, J M.]]
[[Category: Sauder JM]]
[[Category: Tang, B K.]]
[[Category: Tang BK]]
[[Category: Wasserman, S.]]
[[Category: Wasserman S]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgxrc]]
[[Category: Plasmid]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 12:45:01 2009''

Latest revision as of 09:54, 21 February 2024

Crystal structure of an uncharacterized metalloprotein from Deinococcus radiodurans

3gg7, resolution 1.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA