2p5z: Difference between revisions

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{{Seed}}
[[Image:2p5z.png|left|200px]]


<!--
==The E. coli c3393 protein is a component of the type VI secretion system and exhibits structural similarity to T4 bacteriophage tail proteins gp27 and gp5==
The line below this paragraph, containing "STRUCTURE_2p5z", creates the "Structure Box" on the page.
<StructureSection load='2p5z' size='340' side='right'caption='[[2p5z]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2p5z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_O6 Escherichia coli O6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P5Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P5Z FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p5z OCA], [https://pdbe.org/2p5z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p5z RCSB], [https://www.ebi.ac.uk/pdbsum/2p5z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p5z ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2p5z TOPSAN]</span></td></tr>
{{STRUCTURE_2p5z|  PDB=2p5z  |  SCENE=  }}
</table>
 
== Function ==
===The E. coli c3393 protein is a component of the type VI secretion system and exhibits structural similarity to T4 bacteriophage tail proteins gp27 and gp5===
[https://www.uniprot.org/uniprot/A0A0H2VBP9_ECOL6 A0A0H2VBP9_ECOL6]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_19251641}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 19251641 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p5/2p5z_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_19251641}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p5z ConSurf].
2P5Z is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P5Z OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin., Leiman PG, Basler M, Ramagopal UA, Bonanno JB, Sauder JM, Pukatzki S, Burley SK, Almo SC, Mekalanos JJ, Proc Natl Acad Sci U S A. 2009 Mar 17;106(11):4154-9. Epub 2009 Feb 27. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19251641 19251641]
[[Category: Escherichia coli O6]]
[[Category: Escherichia coli o6]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Almo SC]]
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
[[Category: Bonanno JB]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Burley SK]]
[[Category: Nysgxrc]]
[[Category: Freeman JC]]
[[Category: Protein structure initiative]]
[[Category: Gheyi T]]
[[Category: Psi-2]]
[[Category: Lau C]]
[[Category: Structural genomic]]
[[Category: Maletic M]]
[[Category: Unknown function]]
[[Category: Ramagopal UA]]
 
[[Category: Sauder JM]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 25 21:00:34 2009''
[[Category: Sridhar V]]
[[Category: Toro R]]
Retrieved from "https://proteopedia.org/2p5z"