3gvx: Difference between revisions

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{{Seed}}
[[Image:3gvx.jpg|left|200px]]


<!--
==Crystal structure of Glycerate dehydrogenase related protein from Thermoplasma acidophilum==
The line below this paragraph, containing "STRUCTURE_3gvx", creates the "Structure Box" on the page.
<StructureSection load='3gvx' size='340' side='right'caption='[[3gvx]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GVX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GVX FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3gvx|  PDB=3gvx  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gvx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gvx OCA], [https://pdbe.org/3gvx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gvx RCSB], [https://www.ebi.ac.uk/pdbsum/3gvx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gvx ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gvx TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of Glycerate dehydrogenase related protein from Thermoplasma acidophilum===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3GVX is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GVX OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gv/3gvx_consurf.spt"</scriptWhenChecked>
[[Category: Thermoplasma acidophilum]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Burley, S K.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Ibrahim, B Syed.]]
  </jmolCheckbox>
[[Category: Kumaran, D.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gvx ConSurf].
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
<div style="clear:both"></div>
[[Category: Swaminathan, S.]]
__TOC__
[[Category: 11143j]]
</StructureSection>
[[Category: Crystal structure]]
[[Category: Large Structures]]
[[Category: Glycerate dehydrogenase]]
[[Category: Burley SK]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Kumaran D]]
[[Category: Nysgxrc]]
[[Category: Swaminathan S]]
[[Category: Oxidoreductase]]
[[Category: Syed Ibrahim B]]
[[Category: Protein structure initiative]]
[[Category: Psi-ii]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 30 19:24:13 2009''
Retrieved from "https://proteopedia.org/3gvx"