3dlp: Difference between revisions

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{{Seed}}
[[Image:3dlp.png|left|200px]]


<!--
==4-Chlorobenzoyl-CoA Ligase/Synthetase, Mutant D402P, bound to 4CB==
The line below this paragraph, containing "STRUCTURE_3dlp", creates the "Structure Box" on the page.
<StructureSection load='3dlp' size='340' side='right'caption='[[3dlp]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dlp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_sp._AL3007 Alcaligenes sp. AL3007]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DLP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DLP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=174:4-CHLORO-BENZOIC+ACID'>174</scene></td></tr>
{{STRUCTURE_3dlp|  PDB=3dlp  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dlp OCA], [https://pdbe.org/3dlp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dlp RCSB], [https://www.ebi.ac.uk/pdbsum/3dlp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dlp ProSAT]</span></td></tr>
 
</table>
===4-Chlorobenzoyl-CoA Ligase/Synthetase, Mutant D402P, bound to 4CB===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8GN86_9BURK Q8GN86_9BURK]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19320426}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 19320426 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dl/3dlp_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19320426}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3DLP is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Alcaligenes_sp. Alcaligenes sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DLP OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dlp ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:19320426</ref><references group="xtra"/>
</StructureSection>
[[Category: 4-chlorobenzoate--CoA ligase]]
[[Category: Alcaligenes sp. AL3007]]
[[Category: Alcaligenes sp.]]
[[Category: Large Structures]]
[[Category: Cao, J.]]
[[Category: Cao J]]
[[Category: Dunaway-Mariano, D.]]
[[Category: Dunaway-Mariano D]]
[[Category: Gulick, A M.]]
[[Category: Gulick AM]]
[[Category: Lu, X.]]
[[Category: Lu X]]
[[Category: Reger, A S.]]
[[Category: Reger AS]]
[[Category: Wu, R.]]
[[Category: Wu R]]
[[Category: Adenylate-forming enzymes acyl-coa ligase domain alternation]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May  6 10:10:54 2009''

Latest revision as of 09:41, 21 February 2024

4-Chlorobenzoyl-CoA Ligase/Synthetase, Mutant D402P, bound to 4CB

3dlp, resolution 2.60Å

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