2a2i: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2a2i.png|left|200px]]


<!--
==Aquifex aeolicus KDO8PS in complex with PEP, A5P, Zn2+==
The line below this paragraph, containing "STRUCTURE_2a2i", creates the "Structure Box" on the page.
<StructureSection load='2a2i' size='340' side='right'caption='[[2a2i]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2a2i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A2I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A2I FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A5P:ARABINOSE-5-PHOSPHATE'>A5P</scene>, <scene name='pdbligand=PEP:PHOSPHOENOLPYRUVATE'>PEP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2a2i|  PDB=2a2i |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a2i OCA], [https://pdbe.org/2a2i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a2i RCSB], [https://www.ebi.ac.uk/pdbsum/2a2i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a2i ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/KDSA_AQUAE KDSA_AQUAE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a2/2a2i_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a2i ConSurf].
<div style="clear:both"></div>


===Aquifex aeolicus KDO8PS in complex with PEP, A5P, Zn2+===
==See Also==
 
*[[Kdo-8-phosphate synthase|Kdo-8-phosphate synthase]]
 
__TOC__
<!--  
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_19228070}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 19228070 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_19228070}}
 
==About this Structure==
2A2I is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A2I OCA].
 
==Reference==
<ref group="xtra">PMID:19228070</ref><references group="xtra"/>
[[Category: 3-deoxy-8-phosphooctulonate synthase]]
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
[[Category: Gatti, D L.]]
[[Category: Large Structures]]
[[Category: Kona, F.]]
[[Category: Gatti DL]]
[[Category: Lu, J.]]
[[Category: Kona F]]
[[Category: Martin, P.]]
[[Category: Lu J]]
[[Category: Xu, X.]]
[[Category: Martin P]]
[[Category: A5p]]
[[Category: Xu X]]
[[Category: Kdo8p]]
[[Category: Kdo8p]]
[[Category: Pep]]
[[Category: Transferase]]
[[Category: Zn2+]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 13 09:50:42 2009''