3h1m: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3h1m.jpg|left|200px]]


<!--
==Crystal structure of mannose 6-phosphate isomerase (holo; zinc bound)==
The line below this paragraph, containing "STRUCTURE_3h1m", creates the "Structure Box" on the page.
<StructureSection load='3h1m' size='340' side='right'caption='[[3h1m]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3h1m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H1M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H1M FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3h1m|  PDB=3h1m  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h1m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h1m OCA], [https://pdbe.org/3h1m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h1m RCSB], [https://www.ebi.ac.uk/pdbsum/3h1m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h1m ProSAT]</span></td></tr>
 
</table>
===Crystal structure of mannose 6-phosphate isomerase (holo; zinc bound)===
== Function ==
 
[https://www.uniprot.org/uniprot/MANA_SALTY MANA_SALTY] Involved in the conversion of glucose to GDP-L-fucose, which can be converted to L-fucose, a capsular polysaccharide.
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3H1M is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H1M OCA].  
Check<jmol>
[[Category: Mannose-6-phosphate isomerase]]
  <jmolCheckbox>
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h1/3h1m_consurf.spt"</scriptWhenChecked>
[[Category: Giri, G.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Murthy, M R.N.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Sagurthi, S R.]]
  </jmolCheckbox>
[[Category: Savithri, H S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h1m ConSurf].
[[Category: Cupin domain]]
<div style="clear:both"></div>
[[Category: Cytoplasm]]
__TOC__
[[Category: Isomerase]]
</StructureSection>
[[Category: Metal binding protein zinc bound]]
[[Category: Large Structures]]
[[Category: Metal-binding]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Zinc]]
[[Category: Giri G]]
 
[[Category: Murthy MRN]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 20 18:04:18 2009''
[[Category: Sagurthi SR]]
[[Category: Savithri HS]]