1vdk: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: left|200px<br /><applet load="1vdk" size="450" color="white" frame="true" align="right" spinBox="true" caption="1vdk, resolution 1.80Å" /> '''Crystal structure of... |
No edit summary |
||
| (16 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
== | ==Crystal structure of fumarase from thermus thermophilus HB8== | ||
<StructureSection load='1vdk' size='340' side='right'caption='[[1vdk]], [[Resolution|resolution]] 1.80Å' scene=''> | |||
[ | == Structural highlights == | ||
[ | <table><tr><td colspan='2'>[[1vdk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VDK FirstGlance]. <br> | ||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdk OCA], [https://pdbe.org/1vdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vdk RCSB], [https://www.ebi.ac.uk/pdbsum/1vdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vdk ProSAT], [https://www.topsan.org/Proteins/RSGI/1vdk TOPSAN]</span></td></tr> | |||
[ | </table> | ||
[ | == Function == | ||
[[ | [https://www.uniprot.org/uniprot/P84127_THETH P84127_THETH] | ||
[ | == Evolutionary Conservation == | ||
[[ | [[Image:Consurf_key_small.gif|200px|right]] | ||
[ | Check<jmol> | ||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdk_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vdk ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Fumarase|Fumarase]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Thermus thermophilus HB8]] | |||
[[Category: Kunishima N]] | |||
[[Category: Mizutani H]] | |||
Latest revision as of 07:52, 25 October 2023
Crystal structure of fumarase from thermus thermophilus HB8
| ||||||||||||
