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New page: left|200px<br /><applet load="1vhn" size="450" color="white" frame="true" align="right" spinBox="true" caption="1vhn, resolution 1.59Å" /> '''Crystal structure of...
 
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[[Image:1vhn.jpg|left|200px]]<br /><applet load="1vhn" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1vhn, resolution 1.59&Aring;" />
'''Crystal structure of a putative flavin oxidoreductase with flavin'''<br />


==About this Structure==
==Crystal structure of a putative flavin oxidoreductase with flavin==
1VHN is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima] with SO4 and FMN as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1VHN OCA].  
<StructureSection load='1vhn' size='340' side='right'caption='[[1vhn]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[1vhn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VHN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VHN FirstGlance]. <br>
The 1.59 A resolution crystal structure of TM0096, a flavin mononucleotide binding protein from Thermotoga maritima., Park F, Gajiwala K, Noland B, Wu L, He D, Molinari J, Loomis K, Pagarigan B, Kearins P, Christopher J, Peat T, Badger J, Hendle J, Lin J, Buchanan S, Proteins. 2004 May 15;55(3):772-4. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15103641 15103641]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.59&#8491;</td></tr>
[[Category: Single protein]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vhn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vhn OCA], [https://pdbe.org/1vhn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vhn RCSB], [https://www.ebi.ac.uk/pdbsum/1vhn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vhn ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9WXV1_THEMA Q9WXV1_THEMA] Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs (By similarity).[PIRNR:PIRNR006621]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vh/1vhn_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vhn ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
[[Category: GenomiX, Structural.]]
[[Category: Structural GenomiX]]
[[Category: FMN]]
[[Category: SO4]]
[[Category: structural genomics]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 22:28:52 2007''
Retrieved from "https://proteopedia.org/1vhn"