3d7r: Difference between revisions

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{{Seed}}
[[Image:3d7r.jpg|left|200px]]


<!--
==Crystal structure of a putative esterase from Staphylococcus aureus==
The line below this paragraph, containing "STRUCTURE_3d7r", creates the "Structure Box" on the page.
<StructureSection load='3d7r' size='340' side='right'caption='[[3d7r]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3d7r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 Staphylococcus aureus subsp. aureus USA300_TCH1516]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D7R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D7R FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_3d7r|  PDB=3d7r  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d7r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d7r OCA], [https://pdbe.org/3d7r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d7r RCSB], [https://www.ebi.ac.uk/pdbsum/3d7r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d7r ProSAT]</span></td></tr>
 
</table>
===Crystal structure of a putative esterase from Staphylococcus aureus===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3D7R is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_usa300_tch1516 Staphylococcus aureus subsp. aureus usa300_tch1516]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D7R OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d7/3d7r_consurf.spt"</scriptWhenChecked>
[[Category: Staphylococcus aureus subsp. aureus usa300_tch1516]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Battaile, K P.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Chan, T.]]
  </jmolCheckbox>
[[Category: Chirgadze, N Y.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d7r ConSurf].
[[Category: Lam, K.]]
<div style="clear:both"></div>
[[Category: Lam, R.]]
__TOC__
[[Category: Pai, E F.]]
</StructureSection>
[[Category: Romanov, V.]]
[[Category: Large Structures]]
[[Category: Soloveychik, M.]]
[[Category: Staphylococcus aureus subsp. aureus USA300_TCH1516]]
[[Category: Wu-Brown, J.]]
[[Category: Battaile KP]]
[[Category: Alpha/beta fold]]
[[Category: Chan T]]
[[Category: Esterase-like]]
[[Category: Chirgadze NY]]
[[Category: Hydrolase]]
[[Category: Lam K]]
 
[[Category: Lam R]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 17:58:56 2009''
[[Category: Pai EF]]
[[Category: Romanov V]]
[[Category: Soloveychik M]]
[[Category: Wu-Brown J]]

Latest revision as of 09:47, 6 November 2024

Crystal structure of a putative esterase from Staphylococcus aureus

3d7r, resolution 2.01Å

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