3dc6: Difference between revisions

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{{Seed}}
[[Image:3dc6.jpg|left|200px]]


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==Crystal Structure of a manganese superoxide dismutases from Caenorhabditis elegans==
The line below this paragraph, containing "STRUCTURE_3dc6", creates the "Structure Box" on the page.
<StructureSection load='3dc6' size='340' side='right'caption='[[3dc6]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dc6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DC6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DC6 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3dc6| PDB=3dc6 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dc6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dc6 OCA], [https://pdbe.org/3dc6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dc6 RCSB], [https://www.ebi.ac.uk/pdbsum/3dc6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dc6 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SODM1_CAEEL SODM1_CAEEL] Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dc6_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dc6 ConSurf].
<div style="clear:both"></div>


===Crystal Structure of a manganese superoxide dismutases from Caenorhabditis elegans===
==See Also==
 
*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_19052361}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 19052361 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_19052361}}
 
==About this Structure==
3DC6 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DC6 OCA].
 
==Reference==
<ref group="xtra">PMID:19052361</ref><references group="xtra"/>
[[Category: Caenorhabditis elegans]]
[[Category: Caenorhabditis elegans]]
[[Category: Superoxide dismutase]]
[[Category: Large Structures]]
[[Category: Hunter, G J.]]
[[Category: Hunter GJ]]
[[Category: Hunter, T.]]
[[Category: Hunter T]]
[[Category: Phillips, S E.V.]]
[[Category: Phillips SEV]]
[[Category: Stewart, E E.]]
[[Category: Stewart EE]]
[[Category: Trinh, C H.]]
[[Category: Trinh CH]]
[[Category: Alpha hairpin n domain]]
[[Category: Alpha/beta c domain]]
[[Category: Manganese]]
[[Category: Metal-binding]]
[[Category: Mitochondrion]]
[[Category: Oxidoreductase]]
[[Category: Transit peptide]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 10 17:59:18 2009''
Retrieved from "https://proteopedia.org/3dc6"