1ixl: Difference between revisions

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New page: left|200px<br /><applet load="1ixl" size="450" color="white" frame="true" align="right" spinBox="true" caption="1ixl, resolution 1.94Å" /> '''Crystal structure of...
 
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[[Image:1ixl.gif|left|200px]]<br /><applet load="1ixl" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1ixl, resolution 1.94&Aring;" />
'''Crystal structure of uncharacterized protein PH1136 from Pyrococcus horikoshii'''<br />


==About this Structure==
==Crystal structure of uncharacterized protein PH1136 from Pyrococcus horikoshii==
1IXL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1IXL OCA].  
<StructureSection load='1ixl' size='340' side='right'caption='[[1ixl]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[1ixl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IXL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IXL FirstGlance]. <br>
Crystal structure of conserved protein PH1136 from Pyrococcus horikoshii., Tajika Y, Sakai N, Tanaka Y, Yao M, Watanabe N, Tanaka I, Proteins. 2004 Apr 1;55(1):210-3. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=14997554 14997554]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ixl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ixl OCA], [https://pdbe.org/1ixl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ixl RCSB], [https://www.ebi.ac.uk/pdbsum/1ixl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ixl ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O58863_PYRHO O58863_PYRHO]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ix/1ixl_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ixl ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
[[Category: Single protein]]
[[Category: Sakai N]]
[[Category: Sakai, N.]]
[[Category: Tajika Y]]
[[Category: Tajika, Y.]]
[[Category: Tanaka I]]
[[Category: Tanaka, I.]]
[[Category: Tanaka Y]]
[[Category: Tanaka, Y.]]
[[Category: Watanabe N]]
[[Category: Watanabe, N.]]
[[Category: Yao M]]
[[Category: Yao, M.]]
[[Category: alpha+beta]]
[[Category: hot-dog-fold]]
[[Category: structural genomics]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 22:44:12 2007''
Retrieved from "https://proteopedia.org/1ixl"