1n8u: Difference between revisions

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New page: left|200px<br /><applet load="1n8u" size="450" color="white" frame="true" align="right" spinBox="true" caption="1n8u, resolution 1.80Å" /> '''Chemosensory Protein...
 
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[[Image:1n8u.jpg|left|200px]]<br /><applet load="1n8u" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1n8u, resolution 1.80&Aring;" />
'''Chemosensory Protein in Complex with bromo-dodecanol'''<br />


==Overview==
==Chemosensory Protein in Complex with bromo-dodecanol==
Chemosensory proteins (CSPs) have been proposed to transport hydrophobic, chemicals from air to olfactory or taste receptors. They have been, isolated from several sensory organs of a wide range of insect species., The x-ray structure of CSPMbraA6, a 112-aa antennal protein from the moth, Mamestra brassicae (Mbra), was shown to exhibit a novel type of, alpha-helical fold. We have performed a structural and binding study of, CSPMbraA6 to get some insights into its possible molecular function., Tryptophan fluorescence quenching demonstrates the ability of CSPMbraA6 to, bind several types of semio-chemicals or surrogate ligands with microM, K(d). Its crystal structure in complex with one of these compounds, 12-bromo-dodecanol, reveals extensive conformational changes on binding, resulting in the formation of a large cavity filled by three ligand, molecules. Furthermore, binding cooperativity was demonstrated for some, ligands, suggesting a stepwise binding. The peculiar rearrangement of, CSPMbraA6 conformation and the cooperativity phenomenon might trigger the, recognition of chemicals by receptors and induce subsequent signal, transduction.
<StructureSection load='1n8u' size='340' side='right'caption='[[1n8u]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1n8u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mamestra_brassicae Mamestra brassicae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N8U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N8U FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDD:BROMO-DODECANOL'>BDD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n8u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n8u OCA], [https://pdbe.org/1n8u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n8u RCSB], [https://www.ebi.ac.uk/pdbsum/1n8u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n8u ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9NG96_MAMBR Q9NG96_MAMBR]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n8/1n8u_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n8u ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Chemosensory proteins (CSPs) have been proposed to transport hydrophobic chemicals from air to olfactory or taste receptors. They have been isolated from several sensory organs of a wide range of insect species. The x-ray structure of CSPMbraA6, a 112-aa antennal protein from the moth Mamestra brassicae (Mbra), was shown to exhibit a novel type of alpha-helical fold. We have performed a structural and binding study of CSPMbraA6 to get some insights into its possible molecular function. Tryptophan fluorescence quenching demonstrates the ability of CSPMbraA6 to bind several types of semio-chemicals or surrogate ligands with microM K(d). Its crystal structure in complex with one of these compounds, 12-bromo-dodecanol, reveals extensive conformational changes on binding, resulting in the formation of a large cavity filled by three ligand molecules. Furthermore, binding cooperativity was demonstrated for some ligands, suggesting a stepwise binding. The peculiar rearrangement of CSPMbraA6 conformation and the cooperativity phenomenon might trigger the recognition of chemicals by receptors and induce subsequent signal transduction.


==About this Structure==
Moth chemosensory protein exhibits drastic conformational changes and cooperativity on ligand binding.,Campanacci V, Lartigue A, Hallberg BM, Jones TA, Giudici-Orticoni MT, Tegoni M, Cambillau C Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5069-74. Epub 2003 Apr 15. PMID:12697900<ref>PMID:12697900</ref>
1N8U is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mamestra_brassicae Mamestra brassicae] with BDD as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1N8U OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
Moth chemosensory protein exhibits drastic conformational changes and cooperativity on ligand binding., Campanacci V, Lartigue A, Hallberg BM, Jones TA, Giudici-Orticoni MT, Tegoni M, Cambillau C, Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5069-74. Epub 2003 Apr 15. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=12697900 12697900]
</div>
<div class="pdbe-citations 1n8u" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Mamestra brassicae]]
[[Category: Mamestra brassicae]]
[[Category: Single protein]]
[[Category: Cambillau C]]
[[Category: Cambillau, C.]]
[[Category: Campanacci V]]
[[Category: Campanacci, V.]]
[[Category: Giudici-Orticoni MT]]
[[Category: Giudici-Orticoni, M.T.]]
[[Category: Hallberg BM]]
[[Category: Hallberg, B.M.]]
[[Category: Jones TA]]
[[Category: Jones, T.A.]]
[[Category: Lartigue A]]
[[Category: Lartigue, A.]]
[[Category: Tegoni M]]
[[Category: Tegoni, M.]]
[[Category: BDD]]
[[Category: lipid binding protein]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 22:44:13 2007''

Latest revision as of 07:04, 30 October 2024

Chemosensory Protein in Complex with bromo-dodecanol

1n8u, resolution 1.80Å

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