1xok: Difference between revisions

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{{Seed}}
[[Image:1xok.png|left|200px]]


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==crystal structure of alfalfa mosaic virus RNA 3'UTR in complex with coat protein N terminal peptide==
The line below this paragraph, containing "STRUCTURE_1xok", creates the "Structure Box" on the page.
<StructureSection load='1xok' size='340' side='right'caption='[[1xok]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1xok]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alfalfa_mosaic_virus_(strain_YSMV) Alfalfa mosaic virus (strain YSMV)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XOK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XOK FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene></td></tr>
{{STRUCTURE_1xok|  PDB=1xok  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xok FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xok OCA], [https://pdbe.org/1xok PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xok RCSB], [https://www.ebi.ac.uk/pdbsum/1xok PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xok ProSAT]</span></td></tr>
 
</table>
===crystal structure of alfalfa mosaic virus RNA 3'UTR in complex with coat protein N terminal peptide===
== Function ==
 
[https://www.uniprot.org/uniprot/CAPSD_AMVYS CAPSD_AMVYS] Capsid protein. Binds to the to the 3' end of the nonpolyadenylated viral RNA and is involved in viral RNA translation initiation. Probably binds RNA and plays a role in packaging (By similarity).
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_15604410}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 15604410 is the PubMed ID number.
[[Category: Filman DJ]]
-->
[[Category: Gehrke L]]
{{ABSTRACT_PUBMED_15604410}}
[[Category: Guogas LM]]
 
[[Category: Hogle JM]]
==About this Structure==
1XOK is a 4 chains structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XOK OCA].  
 
==Reference==
<ref group="xtra">PMID:15604410</ref><references group="xtra"/>
[[Category: Filman, D J.]]
[[Category: Gehrke, L.]]
[[Category: Guogas, L M.]]
[[Category: Hogle, J M.]]
[[Category: Alpha helix]]
[[Category: Atypical rna duplex]]
[[Category: Protein-rna complex]]
[[Category: Viral protein/rna complex]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 17 09:20:24 2009''
Retrieved from "https://proteopedia.org/1xok"