3dxx: Difference between revisions

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{{Seed}}
[[Image:3dxx.png|left|200px]]


<!--
==Crystal structure of EcTrmB==
The line below this paragraph, containing "STRUCTURE_3dxx", creates the "Structure Box" on the page.
<StructureSection load='3dxx' size='340' side='right'caption='[[3dxx]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dxx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DXX FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
{{STRUCTURE_3dxx| PDB=3dxx |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dxx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dxx OCA], [https://pdbe.org/3dxx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dxx RCSB], [https://www.ebi.ac.uk/pdbsum/3dxx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dxx ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TRMB_ECOLI TRMB_ECOLI] Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/3dxx_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dxx ConSurf].
<div style="clear:both"></div>


===Crystal structure of EcTrmB===
==See Also==
 
*[[Actin-related protein 3D structures|Actin-related protein 3D structures]]
 
*[[TRNA methyltransferase 3D structures|TRNA methyltransferase 3D structures]]
==About this Structure==
__TOC__
3DXX is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXX OCA].
</StructureSection>
 
[[Category: Escherichia coli K-12]]
==Reference==
[[Category: Large Structures]]
<ref group="xtra">PMID:19373903</ref><references group="xtra"/>
[[Category: Gao YX]]
[[Category: Escherichia coli k12]]
[[Category: Liu Q]]
[[Category: Gao, Y X.]]
[[Category: Niu LW]]
[[Category: Liu, Q.]]
[[Category: Teng MK]]
[[Category: Niu, L W.]]
[[Category: Zhou HH]]
[[Category: Teng, M K.]]
[[Category: Zhou, H H.]]
[[Category: Methyltransferase]]
[[Category: Rossmann fold methyltransferase]]
[[Category: S-adenosyl-l-methionine]]
[[Category: Transferase]]
[[Category: Trna modification]]
[[Category: Trna processing]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 17 09:22:28 2009''

Latest revision as of 08:24, 20 March 2024

Crystal structure of EcTrmB

3dxx, resolution 2.05Å

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