3e2d: Difference between revisions

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{{Seed}}
[[Image:3e2d.jpg|left|200px]]


<!--
==The 1.4 A crystal structure of the large and cold-active Vibrio sp. alkaline phosphatase==
The line below this paragraph, containing "STRUCTURE_3e2d", creates the "Structure Box" on the page.
<StructureSection load='3e2d' size='340' side='right'caption='[[3e2d]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3e2d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_sp._G15-21 Vibrio sp. G15-21]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E2D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E2D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3e2d| PDB=3e2d |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e2d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e2d OCA], [https://pdbe.org/3e2d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e2d RCSB], [https://www.ebi.ac.uk/pdbsum/3e2d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e2d ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q93P54_9VIBR Q93P54_9VIBR]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e2/3e2d_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e2d ConSurf].
<div style="clear:both"></div>


===The 1.4 A crystal structure of the large and cold-active Vibrio sp. alkaline phosphatase===
==See Also==
 
*[[Alkaline phosphatase 3D structures|Alkaline phosphatase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_18977465}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 18977465 is the PubMed ID number.
[[Category: Vibrio sp. G15-21]]
-->
[[Category: Asgeirsson B]]
{{ABSTRACT_PUBMED_18977465}}
[[Category: Helland R]]
 
[[Category: Larsen RL]]
==About this Structure==
3E2D is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E2D OCA].
 
==Reference==
<ref group="xtra">PMID:18977465</ref><references group="xtra"/>
[[Category: Alkaline phosphatase]]
[[Category: Bacteria]]
[[Category: Asgeirsson, B.]]
[[Category: Helland, R.]]
[[Category: Larsen, R L.]]
[[Category: Cold-adaptation]]
[[Category: Crystallography]]
[[Category: Dimer]]
[[Category: Hydrolase]]
[[Category: Metalloenzyme]]
[[Category: Psychrophilic bacteria]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 17 10:27:40 2009''

Latest revision as of 08:24, 20 March 2024

The 1.4 A crystal structure of the large and cold-active Vibrio sp. alkaline phosphatase

3e2d, resolution 1.40Å

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