2kj8: Difference between revisions

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{{Seed}}
[[Image:2kj8.jpg|left|200px]]


<!--
==NMR structure of fragment 87-196 from the putative phage integrase IntS of E. coli: Northeast Structural Genomics Consortium target ER652A, PSI-2==
The line below this paragraph, containing "STRUCTURE_2kj8", creates the "Structure Box" on the page.
<StructureSection load='2kj8' size='340' side='right'caption='[[2kj8]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2kj8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KJ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KJ8 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kj8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kj8 OCA], [https://pdbe.org/2kj8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kj8 RCSB], [https://www.ebi.ac.uk/pdbsum/2kj8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kj8 ProSAT], [https://www.topsan.org/Proteins/NESGC/2kj8 TOPSAN]</span></td></tr>
{{STRUCTURE_2kj8|  PDB=2kj8  |  SCENE=  }}
</table>
 
== Function ==
===NMR structure of fragment 87-196 from the putative phage integrase IntS of E. coli: Northeast Structural Genomics Consortium target ER652A, PSI-2===
[https://www.uniprot.org/uniprot/INTS_ECOLI INTS_ECOLI] Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome.
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2KJ8 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KJ8 OCA].  
  <jmolCheckbox>
[[Category: Escherichia coli k-12]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kj/2kj8_consurf.spt"</scriptWhenChecked>
[[Category: Ciccosanti, C.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Cort, J R.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Everett, J K.]]
  </jmolCheckbox>
[[Category: Janjua, H.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kj8 ConSurf].
[[Category: Kennedy, M A.]]
<div style="clear:both"></div>
[[Category: Montelione, G T.]]
__TOC__
[[Category: NESG, Northeast Structural Genomics Consortium.]]
</StructureSection>
[[Category: Nair, R.]]
[[Category: Escherichia coli K-12]]
[[Category: Ramelot, T A.]]
[[Category: Large Structures]]
[[Category: Rost, B.]]
[[Category: Ciccosanti C]]
[[Category: Swapna, G.]]
[[Category: Cort JR]]
[[Category: Wang, D.]]
[[Category: Everett JK]]
[[Category: Xiao, R.]]
[[Category: Janjua H]]
[[Category: Cps-53]]
[[Category: Kennedy MA]]
[[Category: Dna binding protein]]
[[Category: Montelione GT]]
[[Category: Dna integration]]
[[Category: Nair R]]
[[Category: Dna recombination]]
[[Category: Ramelot TA]]
[[Category: Intc]]
[[Category: Rost B]]
[[Category: Integrase]]
[[Category: Swapna G]]
[[Category: Int]]
[[Category: Wang D]]
[[Category: Nesg]]
[[Category: Xiao R]]
[[Category: Northeast structural genomics consortium]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
[[Category: Yfdb]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  8 12:35:46 2009''

Latest revision as of 09:39, 22 May 2024

NMR structure of fragment 87-196 from the putative phage integrase IntS of E. coli: Northeast Structural Genomics Consortium target ER652A, PSI-2

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