3g4f: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3g4f.png|left|200px]]


<!--
==Crystal Structure of (+)- -Cadinene Synthase from Gossypium arboreum in complex with 2-fluorofarnesyl diphosphate==
The line below this paragraph, containing "STRUCTURE_3g4f", creates the "Structure Box" on the page.
<StructureSection load='3g4f' size='340' side='right'caption='[[3g4f]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3g4f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Gossypium_arboreum Gossypium arboreum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G4F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G4F FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.651&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=FPF:(2Z,6E)-2-FLUORO-3,7,11-TRIMETHYLDODECA-2,6,10-TRIEN-1-YL+TRIHYDROGEN+DIPHOSPHATE'>FPF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_3g4f|  PDB=3g4f  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g4f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g4f OCA], [https://pdbe.org/3g4f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g4f RCSB], [https://www.ebi.ac.uk/pdbsum/3g4f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g4f ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of (+)- -Cadinene Synthase from Gossypium arboreum in complex with 2-fluorofarnesyl diphosphate===
== Function ==
 
[https://www.uniprot.org/uniprot/DCS1_GOSAR DCS1_GOSAR] Responsible for the cyclization of trans,trans-farnesyl diphosphate (FPP) to (+)-delta cadinene.<ref>PMID:19489610</ref>  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19489610}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 19489610 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g4/3g4f_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19489610}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3G4F is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Gossypium_arboreum Gossypium arboreum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G4F OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g4f ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
<ref group="xtra">PMID:19489610</ref><references group="xtra"/>
<references/>
__TOC__
</StructureSection>
[[Category: Gossypium arboreum]]
[[Category: Gossypium arboreum]]
[[Category: Christianson, D W.]]
[[Category: Large Structures]]
[[Category: Costanzo, L Di.]]
[[Category: Christianson DW]]
[[Category: Gennadios, H A.]]
[[Category: Di Costanzo L]]
[[Category: Cyclase]]
[[Category: Gennadios HA]]
[[Category: Lyase]]
[[Category: Magnesium]]
[[Category: Metal-binding]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 29 16:18:51 2009''

Latest revision as of 06:37, 3 April 2024

Crystal Structure of (+)- -Cadinene Synthase from Gossypium arboreum in complex with 2-fluorofarnesyl diphosphate

3g4f, resolution 2.65Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=3g4f&oldid=4118888"