2kko: Difference between revisions

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{{Seed}}
[[Image:2kko.jpg|left|200px]]


<!--
==Solution NMR structure of the homodimeric winged helix-turn-helix DNA-binding domain (fragment 1-100) Mb0332 from Mycobacterium bovis, a possible ArsR-family transcriptional regulator. Northeast Structural Genomics Consortium Target MbR242E.==
The line below this paragraph, containing "STRUCTURE_2kko", creates the "Structure Box" on the page.
<StructureSection load='2kko' size='340' side='right'caption='[[2kko]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2kko]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_variant_bovis Mycobacterium tuberculosis variant bovis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KKO FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kko FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kko OCA], [https://pdbe.org/2kko PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kko RCSB], [https://www.ebi.ac.uk/pdbsum/2kko PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kko ProSAT], [https://www.topsan.org/Proteins/NESGC/2kko TOPSAN]</span></td></tr>
{{STRUCTURE_2kko|  PDB=2kko  |  SCENE=  }}
</table>
 
== Evolutionary Conservation ==
===Solution NMR structure of the homodimeric winged helix-turn-helix DNA-binding domain (fragment 1-100) Mb0332 from Mycobacterium bovis, a possible ArsR-family transcriptional regulator. Northeast Structural Genomics Consortium Target MbR242E.===
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kk/2kko_consurf.spt"</scriptWhenChecked>
2KKO is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mycobacterium_bovis Mycobacterium bovis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKO OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Mycobacterium bovis]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Acton, T B.]]
  </jmolCheckbox>
[[Category: Ciccosanti, C.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kko ConSurf].
[[Category: Everett, J K.]]
<div style="clear:both"></div>
[[Category: Jiang, M.]]
__TOC__
[[Category: Kennedy, M A.]]
</StructureSection>
[[Category: Montelione, G T.]]
[[Category: Large Structures]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Mycobacterium tuberculosis variant bovis]]
[[Category: Nair, R.]]
[[Category: Acton TB]]
[[Category: Ramelot, J R.]]
[[Category: Ciccosanti C]]
[[Category: Ramelot, T A.]]
[[Category: Cort JR]]
[[Category: Rost, B.]]
[[Category: Everett JK]]
[[Category: Swapna, G.]]
[[Category: Jiang M]]
[[Category: Wang, D.]]
[[Category: Kennedy MA]]
[[Category: Xiao, R.]]
[[Category: Montelione GT]]
[[Category: Dna binding protein]]
[[Category: Nair R]]
[[Category: Dna-binding]]
[[Category: Ramelot TA]]
[[Category: Homodimer]]
[[Category: Rost B]]
[[Category: Nesg]]
[[Category: Swapna G]]
[[Category: Northeast structural genomics consortium]]
[[Category: Wang D]]
[[Category: Protein structure initiative]]
[[Category: Xiao R]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcriptional regulator]]
[[Category: Transferase]]
[[Category: Whth]]
[[Category: Winged helix-turn-helix]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 12 13:39:07 2009''

Latest revision as of 09:48, 9 May 2024

Solution NMR structure of the homodimeric winged helix-turn-helix DNA-binding domain (fragment 1-100) Mb0332 from Mycobacterium bovis, a possible ArsR-family transcriptional regulator. Northeast Structural Genomics Consortium Target MbR242E.

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