3ij5: Difference between revisions

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{{Seed}}
[[Image:3ij5.jpg|left|200px]]


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==1.95 Angstrom Resolution Crystal Structure of 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Yersinia pestis==
The line below this paragraph, containing "STRUCTURE_3ij5", creates the "Structure Box" on the page.
<StructureSection load='3ij5' size='340' side='right'caption='[[3ij5]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ij5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IJ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IJ5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
{{STRUCTURE_3ij5|  PDB=3ij5  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ij5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ij5 OCA], [https://pdbe.org/3ij5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ij5 RCSB], [https://www.ebi.ac.uk/pdbsum/3ij5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ij5 ProSAT], [https://www.topsan.org/Proteins/CSGID/3ij5 TOPSAN]</span></td></tr>
 
</table>
===1.95 Angstrom Resolution Crystal Structure of 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Yersinia pestis===
== Function ==
 
[https://www.uniprot.org/uniprot/KDSC_YERPE KDSC_YERPE]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3IJ5 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Yersinia_pestis_co92 Yersinia pestis co92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IJ5 OCA].  
Check<jmol>
[[Category: 3-deoxy-manno-octulosonate-8-phosphatase]]
  <jmolCheckbox>
[[Category: Yersinia pestis co92]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/3ij5_consurf.spt"</scriptWhenChecked>
[[Category: Anderson, W F.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Dubrovska, I.]]
  </jmolCheckbox>
[[Category: Halavaty, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ij5 ConSurf].
[[Category: Minasov, G.]]
<div style="clear:both"></div>
[[Category: Papazisi, L.]]
__TOC__
[[Category: Shuvalova, L.]]
</StructureSection>
[[Category: Winsor, J.]]
[[Category: Large Structures]]
[[Category: 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase]]
[[Category: Yersinia pestis CO92]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Anderson WF]]
[[Category: Csgid]]
[[Category: Dubrovska I]]
[[Category: Hydrolase]]
[[Category: Halavaty A]]
[[Category: Idp02274]]
[[Category: Minasov G]]
[[Category: Lipopolysaccharide biosynthesis]]
[[Category: Papazisi L]]
[[Category: Magnesium]]
[[Category: Shuvalova L]]
[[Category: Structural genomic]]
[[Category: Winsor J]]
 
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Retrieved from "https://proteopedia.org/3ij5"