1k3r: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
New page: left|200px<br /><applet load="1k3r" size="450" color="white" frame="true" align="right" spinBox="true" caption="1k3r, resolution 2.30Å" /> '''Crystal Structure of...
 
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(17 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1k3r.gif|left|200px]]<br /><applet load="1k3r" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1k3r, resolution 2.30&Aring;" />
'''Crystal Structure of the Methyltransferase with a Knot from Methanobacterium thermoautotrophicum'''<br />


==About this Structure==
==Crystal Structure of the Methyltransferase with a Knot from Methanobacterium thermoautotrophicum==
1K3R is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1K3R OCA].  
<StructureSection load='1k3r' size='340' side='right'caption='[[1k3r]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 
== Structural highlights ==
==Reference==
<table><tr><td colspan='2'>[[1k3r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K3R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K3R FirstGlance]. <br>
Deep trefoil knot implicated in RNA binding found in an archaebacterial protein., Zarembinski TI, Kim Y, Peterson K, Christendat D, Dharamsi A, Arrowsmith CH, Edwards AM, Joachimiak A, Proteins. 2003 Feb 1;50(2):177-83. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=12486711 12486711]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k3r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k3r OCA], [https://pdbe.org/1k3r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k3r RCSB], [https://www.ebi.ac.uk/pdbsum/1k3r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k3r ProSAT], [https://www.topsan.org/Proteins/MCSG/1k3r TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O26109_METTH O26109_METTH]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/1k3r_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k3r ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanothermobacter thermautotrophicus]]
[[Category: Methanothermobacter thermautotrophicus]]
[[Category: Single protein]]
[[Category: Arrowsmith CH]]
[[Category: Arrowsmith, C.H.]]
[[Category: Christendat D]]
[[Category: Christendat, D.]]
[[Category: Dharamsi A]]
[[Category: Dharamsi, A.]]
[[Category: Edwards AM]]
[[Category: Edwards, A.M.]]
[[Category: Joachimiak A]]
[[Category: Joachimiak, A.]]
[[Category: Kim Y]]
[[Category: Kim, Y.]]
[[Category: Peterson K]]
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
[[Category: Zarembinski TI]]
[[Category: Peterson, K.]]
[[Category: Zarembinski, T.I.]]
[[Category: beta barrel]]
[[Category: mcsg]]
[[Category: midwest center for structural genomics]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomics]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 00:40:52 2007''

Latest revision as of 07:44, 7 February 2024

Crystal Structure of the Methyltransferase with a Knot from Methanobacterium thermoautotrophicum

1k3r, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=1k3r&oldid=4045650"