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New page: left|200px<br /><applet load="1bxt" size="450" color="white" frame="true" align="right" spinBox="true" caption="1bxt, resolution 1.85Å" /> '''STREPTOCOCCAL SUPERA...
 
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[[Image:1bxt.gif|left|200px]]<br /><applet load="1bxt" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1bxt, resolution 1.85&Aring;" />
'''STREPTOCOCCAL SUPERANTIGEN (SSA) FROM STREPTOCOCCUS PYOGENES'''<br />


==Overview==
==STREPTOCOCCAL SUPERANTIGEN (SSA) FROM STREPTOCOCCUS PYOGENES==
Streptococcal superantigen (SSA) is a 28,000 Mr toxin originally isolated, from a pathogenic strain of Streptococcus pyogenes that has 60% sequence, identity with staphylococcal enterotoxin B (SEB). SSA and SEB, however, do, not compete for binding on the surfaces of cells expressing MHC class II, molecules. This behavior had been ascribed to SSA and SEB binding to, distinct sites on, or different subsets of, HLA-DR molecules. Here we, demonstrate that SSA binds predominantly to HLA-DQ, rather than to HLA-DR, molecules, and present the crystal structure of SSA at 1.85 A resolution., These data provide a structural basis for interpreting the interaction of, SSA with HLA-DQ molecules as well as a foundation for understanding, bacterial superantigen affinities for distinct MHC isotypes.
<StructureSection load='1bxt' size='340' side='right'caption='[[1bxt]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1bxt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BXT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BXT FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bxt OCA], [https://pdbe.org/1bxt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bxt RCSB], [https://www.ebi.ac.uk/pdbsum/1bxt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bxt ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q54971_STRPY Q54971_STRPY]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bx/1bxt_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bxt ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Streptococcal superantigen (SSA) is a 28,000 Mr toxin originally isolated from a pathogenic strain of Streptococcus pyogenes that has 60% sequence identity with staphylococcal enterotoxin B (SEB). SSA and SEB, however, do not compete for binding on the surfaces of cells expressing MHC class II molecules. This behavior had been ascribed to SSA and SEB binding to distinct sites on, or different subsets of, HLA-DR molecules. Here we demonstrate that SSA binds predominantly to HLA-DQ, rather than to HLA-DR molecules, and present the crystal structure of SSA at 1.85 A resolution. These data provide a structural basis for interpreting the interaction of SSA with HLA-DQ molecules as well as a foundation for understanding bacterial superantigen affinities for distinct MHC isotypes.


==About this Structure==
Structural basis for HLA-DQ binding by the streptococcal superantigen SSA.,Sundberg E, Jardetzky TS Nat Struct Biol. 1999 Feb;6(2):123-9. PMID:10048922<ref>PMID:10048922</ref>
1BXT is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1BXT OCA].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
Structural basis for HLA-DQ binding by the streptococcal superantigen SSA., Sundberg E, Jardetzky TS, Nat Struct Biol. 1999 Feb;6(2):123-9. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=10048922 10048922]
</div>
[[Category: Single protein]]
<div class="pdbe-citations 1bxt" style="background-color:#fffaf0;"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus pyogenes]]
[[Category: Streptococcus pyogenes]]
[[Category: Jardetzky, T.]]
[[Category: Jardetzky T]]
[[Category: Sundberg, E.]]
[[Category: Sundberg E]]
[[Category: bacterial superantigen]]
[[Category: mhc class ii interaction]]
[[Category: t cell activation]]
[[Category: toxic shock-like syndrome]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 00:45:57 2007''

Latest revision as of 23:50, 20 November 2024

STREPTOCOCCAL SUPERANTIGEN (SSA) FROM STREPTOCOCCUS PYOGENES

1bxt, resolution 1.85Å

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