3i3f: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3i3f.jpg|left|200px]]


<!--
==Hypothetical protein from Giardia lamblia GL50803_14299==
The line below this paragraph, containing "STRUCTURE_3i3f", creates the "Structure Box" on the page.
<StructureSection load='3i3f' size='340' side='right'caption='[[3i3f]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3i3f]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Giardia_lamblia_ATCC_50803 Giardia lamblia ATCC 50803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I3F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I3F FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BUA:BUTANOIC+ACID'>BUA</scene>, <scene name='pdbligand=LEA:PENTANOIC+ACID'>LEA</scene></td></tr>
{{STRUCTURE_3i3f|  PDB=3i3f  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i3f OCA], [https://pdbe.org/3i3f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i3f RCSB], [https://www.ebi.ac.uk/pdbsum/3i3f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i3f ProSAT]</span></td></tr>
 
</table>
===Hypothetical protein from Giardia lamblia GL50803_14299===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3I3F is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Giardia_lamblia_atcc_50803 Giardia lamblia atcc 50803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I3F OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i3/3i3f_consurf.spt"</scriptWhenChecked>
[[Category: Giardia lamblia atcc 50803]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Ssgcid, Seattle Structural Genomics Center for Infectious Disease.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Decode]]
  </jmolCheckbox>
[[Category: Hypothetical]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i3f ConSurf].
[[Category: Infectious disease]]
<div style="clear:both"></div>
[[Category: Niaid]]
__TOC__
[[Category: Seattle structural genomics center for infectious disease]]
</StructureSection>
[[Category: Ssgcid]]
[[Category: Giardia lamblia ATCC 50803]]
[[Category: Structural genomic]]
[[Category: Large Structures]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Sep  3 16:14:19 2009''