3ig2: Difference between revisions

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{{Seed}}
[[Image:3ig2.jpg|left|200px]]


<!--
==The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A==
The line below this paragraph, containing "STRUCTURE_3ig2", creates the "Structure Box" on the page.
<StructureSection load='3ig2' size='340' side='right'caption='[[3ig2]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ig2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IG2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IG2 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3ig2|  PDB=3ig2 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ig2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ig2 OCA], [https://pdbe.org/3ig2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ig2 RCSB], [https://www.ebi.ac.uk/pdbsum/3ig2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ig2 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/SYFB_BACFN SYFB_BACFN]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ig/3ig2_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ig2 ConSurf].
<div style="clear:both"></div>


===The Crystal Structure of a Putative Phenylalanyl-tRNA synthetase (PheRS) beta chain domain from Bacteroides fragilis to 2.1A===
==See Also==
 
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3IG2 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IG2 OCA].
[[Category: Bacteroides fragilis]]
[[Category: Bacteroides fragilis]]
[[Category: Phenylalanine--tRNA ligase]]
[[Category: Large Structures]]
[[Category: Hendricks, R.]]
[[Category: Hendricks R]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: Keigher, L.]]
[[Category: Keigher L]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Sather A]]
[[Category: Sather, A.]]
[[Category: Stein AJ]]
[[Category: Stein, A J.]]
[[Category: Aminoacyl-trna synthetase]]
[[Category: Atp-binding]]
[[Category: Bacteroide]]
[[Category: Cytoplasm]]
[[Category: Fragili]]
[[Category: Ligase]]
[[Category: Magnesium]]
[[Category: Mcsg]]
[[Category: Metal-binding]]
[[Category: Midwest center for structural genomic]]
[[Category: Nucleotide-binding]]
[[Category: Phenylalanyl-trna]]
[[Category: Pher]]
[[Category: Protein biosynthesis]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Rna-binding]]
[[Category: Structural genomic]]
[[Category: Synthetase]]
[[Category: Trna-binding]]
 
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Retrieved from "https://proteopedia.org/3ig2"