1iuc: Difference between revisions

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{{Seed}}
[[Image:1iuc.png|left|200px]]


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==Fucose-specific lectin from Aleuria aurantia with three ligands==
The line below this paragraph, containing "STRUCTURE_1iuc", creates the "Structure Box" on the page.
<StructureSection load='1iuc' size='340' side='right'caption='[[1iuc]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1iuc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aleuria_aurantia Aleuria aurantia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IUC FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=FUL:BETA-L-FUCOSE'>FUL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1iuc|  PDB=1iuc  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1iuc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1iuc OCA], [https://pdbe.org/1iuc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1iuc RCSB], [https://www.ebi.ac.uk/pdbsum/1iuc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iuc ProSAT], [https://www.topsan.org/Proteins/RSGI/1iuc TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LECF_ALEAU LECF_ALEAU] Might have a role in the differentiation of cells. Binds L-fucose.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/1iuc_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1iuc ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Aleuria aurantia possesses a fucose-specific lectin (AAL) that is widely used as a specific probe for fucose. Fucosylated sugars often play pivotal roles in many cellular processes. We have determined the crystal structure of AAL at 2.24 A resolution in complex with only three fucose molecules in its five sugar binding sites of a six-fold beta-propeller structure. Very recently, the structure of AAL has been independently determined, showing that all the five binding sites were occupied by fucose molecules [Wimmerova, M., et al. (2003) J. Biol. Chem. 278, 27059-27067]. Stabilization of the arginine conformation bound to fucose molecules plays an essential role in generating the difference in the affinity in the five binding sites. Binding models with a couple of saccharides based on biochemical assays suggest that hydrophobic contacts also play important roles in AAL recognizing its ligand.


===Fucose-specific lectin from Aleuria aurantia with three ligands===
Crystal structure of fucose-specific lectin from Aleuria aurantia binding ligands at three of its five sugar recognition sites.,Fujihashi M, Peapus DH, Kamiya N, Nagata Y, Miki K Biochemistry. 2003 Sep 30;42(38):11093-9. PMID:14503859<ref>PMID:14503859</ref>


 
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
The line below this paragraph, {{ABSTRACT_PUBMED_14503859}}, adds the Publication Abstract to the page
<div class="pdbe-citations 1iuc" style="background-color:#fffaf0;"></div>
(as it appears on PubMed at http://www.pubmed.gov), where 14503859 is the PubMed ID number.
== References ==
-->
<references/>
{{ABSTRACT_PUBMED_14503859}}
__TOC__
 
</StructureSection>
==About this Structure==
1IUC is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Aleuria_aurantia Aleuria aurantia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IUC OCA].
 
==Reference==
<ref group="xtra">PMID:14503859</ref><references group="xtra"/>
[[Category: Aleuria aurantia]]
[[Category: Aleuria aurantia]]
[[Category: Fujihashi, M.]]
[[Category: Large Structures]]
[[Category: Kamiya, N.]]
[[Category: Fujihashi M]]
[[Category: Miki, K.]]
[[Category: Kamiya N]]
[[Category: Nagata, Y.]]
[[Category: Miki K]]
[[Category: Peapus, D H.]]
[[Category: Nagata Y]]
[[Category: Lectin]]
[[Category: Peapus DH]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Sugar binding protein]]
 
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Retrieved from "https://proteopedia.org/1iuc"