2kmf: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2kmf.jpg|left|200px]]


<!--
==Solution Structure of Psb27 from cyanobacterial photosystem II==
The line below this paragraph, containing "STRUCTURE_2kmf", creates the "Structure Box" on the page.
<StructureSection load='2kmf' size='340' side='right'caption='[[2kmf]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2kmf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KMF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KMF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kmf OCA], [https://pdbe.org/2kmf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kmf RCSB], [https://www.ebi.ac.uk/pdbsum/2kmf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kmf ProSAT]</span></td></tr>
{{STRUCTURE_2kmf|  PDB=2kmf  |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/PSB27_SYNY3 PSB27_SYNY3] Plays a role in the repair and/or biogenesis of the calcium-manganese-oxide cluster on the lumenal face of the thylakoid membrane. Photosystem II (PSII) complexes containing this protein are monomeric, are assembly intermediates lacking the calcium-manganese-oxide cluster and miss some of the lumenal subunits. Probably blocks binding of some of the small lumenal subunits.<ref>PMID:18089572</ref> <ref>PMID:18834146</ref> <ref>PMID:21592967</ref> <ref>PMID:22031695</ref> <ref>PMID:22086423</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/km/2kmf_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kmf ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Psb27 is a highly conserved component of photosystem II. The three-dimensional structure has a well-defined helical core, composed of four helices arranged in a right-handed up-down-up-down fold, with a less ordered region of the structure located at the N-terminus. The position of conserved residues on the surface suggests conserved functional roles for distinct interconnected features encompassing a P-Phi-P loop, a polar patch spanning helices alpha3 and alpha4, and the N-terminal sequence.


===Solution Structure of Psb27 from cyanobacterial photosystem II===
Solution Structure of Psb27 from Cyanobacterial Photosystem II .,Mabbitt PD, Rautureau GJ, Day CL, Wilbanks SM, Eaton-Rye JJ, Hinds MG Biochemistry. 2009 Aug 27. PMID:19697958<ref>PMID:19697958</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 2kmf" style="background-color:#fffaf0;"></div>


<!--
==See Also==
The line below this paragraph, {{ABSTRACT_PUBMED_19697958}}, adds the Publication Abstract to the page
*[[Photosystem II 3D structures|Photosystem II 3D structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 19697958 is the PubMed ID number.
== References ==
-->
<references/>
{{ABSTRACT_PUBMED_19697958}}
__TOC__
 
</StructureSection>
==About this Structure==
[[Category: Large Structures]]
2KMF is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KMF OCA].
[[Category: Synechocystis sp. PCC 6803]]
 
[[Category: Day CL]]
==Reference==
[[Category: Eaton-Rye JJ]]
<ref group="xtra">PMID:19697958</ref><references group="xtra"/>
[[Category: Hinds MG]]
[[Category: Synechocystis sp.]]
[[Category: Mabbitt PD]]
[[Category: Day, C L.]]
[[Category: Rautureau GJP]]
[[Category: Eaton-Rye, J J.]]
[[Category: Wilbanks SM]]
[[Category: Hinds, M G.]]
[[Category: Mabbitt, P D.]]
[[Category: Rautureau, G J.P.]]
[[Category: Wilbanks, S M.]]
[[Category: Cyanobacteria]]
[[Category: Helical bundle]]
[[Category: Photosynthesis]]
[[Category: Photosystem ii]]
[[Category: Psb27]]
[[Category: Structure]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep  9 09:17:25 2009''

Latest revision as of 19:12, 29 May 2024

Solution Structure of Psb27 from cyanobacterial photosystem II

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2kmf&oldid=4174155"