1wye: Difference between revisions
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New page: left|200px<br /><applet load="1wye" size="450" color="white" frame="true" align="right" spinBox="true" caption="1wye, resolution 2.80Å" /> '''Crystal structure of... |
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== | ==Crystal structure of 2-keto-3-deoxygluconate kinase (form 1) from Sulfolobus Tokodaii== | ||
<StructureSection load='1wye' size='340' side='right'caption='[[1wye]], [[Resolution|resolution]] 2.80Å' scene=''> | |||
== Structural highlights == | |||
[[Category: | <table><tr><td colspan='2'>[[1wye]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WYE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WYE FirstGlance]. <br> | ||
[[Category: | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | ||
[[Category: Hossain | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wye FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wye OCA], [https://pdbe.org/1wye PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wye RCSB], [https://www.ebi.ac.uk/pdbsum/1wye PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wye ProSAT]</span></td></tr> | ||
[[Category: Koike | </table> | ||
[[Category: Sekiguchi | == Function == | ||
[[Category: Suzuki | [https://www.uniprot.org/uniprot/KDGK_SULTO KDGK_SULTO] Involved in the degradation of glucose via the semi-phosphorylative Entner-Doudoroff pathway. Catalyzes the phosphorylation of 2-keto-3-deoxygluconate (KDG) to produce 2-keto-3-deoxy-6-phosphogluconate (KDPG). Can also use GTP, but not ADP or AMP, as a phosphoryl donor and 2-keto-D-gluconate (KG) as a phosphoryl acceptor.<ref>PMID:17407821</ref> | ||
[[Category: Takenaka | == Evolutionary Conservation == | ||
[[Category: Toyoda | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wy/1wye_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wye ConSurf]. | |||
<div style="clear:both"></div> | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Sulfurisphaera tokodaii str. 7]] | |||
[[Category: Hossain MT]] | |||
[[Category: Koike I]] | |||
[[Category: Sekiguchi T]] | |||
[[Category: Suzuki K]] | |||
[[Category: Takenaka A]] | |||
[[Category: Toyoda T]] | |||
Latest revision as of 13:35, 13 March 2024
Crystal structure of 2-keto-3-deoxygluconate kinase (form 1) from Sulfolobus Tokodaii
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