3i5x: Difference between revisions

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{{Seed}}
[[Image:3i5x.jpg|left|200px]]


<!--
==Structure of Mss116p bound to ssRNA and AMP-PNP==
The line below this paragraph, containing "STRUCTURE_3i5x", creates the "Structure Box" on the page.
<StructureSection load='3i5x' size='340' side='right'caption='[[3i5x]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3i5x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I5X FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_3i5x| PDB=3i5x |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i5x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5x OCA], [https://pdbe.org/3i5x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i5x RCSB], [https://www.ebi.ac.uk/pdbsum/3i5x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5x ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MS116_YEAST MS116_YEAST] ATP-dependent RNA helicase required for mitochondrial splicing of group I and II introns. Specifically involved in the ATP-dependent splicing of the bl1 intron of COB. Also required for efficient mitochondrial translation.<ref>PMID:2535893</ref> <ref>PMID:7567443</ref> <ref>PMID:12402239</ref> <ref>PMID:15618406</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/3i5x_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i5x ConSurf].
<div style="clear:both"></div>


===Structure of Mss116p bound to ssRNA and AMP-PNP===
==See Also==
 
*[[Helicase 3D structures|Helicase 3D structures]]
 
== References ==
==About this Structure==
<references/>
3I5X is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5X OCA].
__TOC__
 
</StructureSection>
==Reference==
[[Category: Large Structures]]
<ref group="xtra">PMID:19652352</ref><references group="xtra"/>
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Campo, M Del.]]
[[Category: Del Campo M]]
[[Category: Lambowitz, A M.]]
[[Category: Lambowitz AM]]
[[Category: Atp-binding]]
[[Category: Dead-box]]
[[Category: Helicase]]
[[Category: Hydrolase]]
[[Category: Hydrolase/rna complex]]
[[Category: Mitochondrion]]
[[Category: Mrna processing]]
[[Category: Mrna splicing]]
[[Category: Nucleotide-binding]]
[[Category: Protein-rna complex]]
[[Category: Rna helicase]]
[[Category: Rna-binding]]
[[Category: Transit peptide]]
[[Category: Translation regulation]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep  9 09:49:55 2009''
Retrieved from "https://proteopedia.org/3i5x"