3is6: Difference between revisions

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{{Seed}}
[[Image:3is6.jpg|left|200px]]


<!--
==The Crystal Structure of a domain of a putative Permease protein from Porphyromonas gingivalis to 2A==
The line below this paragraph, containing "STRUCTURE_3is6", creates the "Structure Box" on the page.
<StructureSection load='3is6' size='340' side='right'caption='[[3is6]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3is6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IS6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IS6 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
{{STRUCTURE_3is6|  PDB=3is6  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3is6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3is6 OCA], [https://pdbe.org/3is6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3is6 RCSB], [https://www.ebi.ac.uk/pdbsum/3is6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3is6 ProSAT]</span></td></tr>
 
</table>
===The Crystal Structure of a domain of a putative Permease protein from Porphyromonas gingivalis to 2A===
== Function ==
 
[https://www.uniprot.org/uniprot/Q7MWD8_PORGI Q7MWD8_PORGI]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3IS6 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Porphyromonas_gingivalis_w83 Porphyromonas gingivalis w83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IS6 OCA].  
Check<jmol>
[[Category: Porphyromonas gingivalis w83]]
  <jmolCheckbox>
[[Category: Duggan, E.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/3is6_consurf.spt"</scriptWhenChecked>
[[Category: Joachimiak, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Moy, S.]]
  </jmolCheckbox>
[[Category: Sather, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3is6 ConSurf].
[[Category: Stein, A J.]]
<div style="clear:both"></div>
[[Category: Abc]]
__TOC__
[[Category: Cell membrane]]
</StructureSection>
[[Category: Domain]]
[[Category: Large Structures]]
[[Category: Gingivali]]
[[Category: Porphyromonas gingivalis W83]]
[[Category: Mcsg]]
[[Category: Duggan E]]
[[Category: Membrane]]
[[Category: Joachimiak A]]
[[Category: Midwest center for structural genomic]]
[[Category: Moy S]]
[[Category: Permease]]
[[Category: Sather A]]
[[Category: Porphyromona]]
[[Category: Stein AJ]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Transmembrane]]
[[Category: Transport protein]]
[[Category: Transporter]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep  9 09:53:31 2009''
Retrieved from "https://proteopedia.org/3is6"