3ifr: Difference between revisions

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{{Seed}}
[[Image:3ifr.png|left|200px]]


<!--
==The crystal structure of xylulose kinase from Rhodospirillum rubrum==
The line below this paragraph, containing "STRUCTURE_3ifr", creates the "Structure Box" on the page.
<StructureSection load='3ifr' size='340' side='right'caption='[[3ifr]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IFR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IFR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_3ifr|  PDB=3ifr  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ifr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ifr OCA], [https://pdbe.org/3ifr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ifr RCSB], [https://www.ebi.ac.uk/pdbsum/3ifr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ifr ProSAT]</span></td></tr>
 
</table>
===The crystal structure of xylulose kinase from Rhodospirillum rubrum===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3IFR is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum_atcc_11170 Rhodospirillum rubrum atcc 11170]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IFR OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/if/3ifr_consurf.spt"</scriptWhenChecked>
[[Category: Rhodospirillum rubrum atcc 11170]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Xylulokinase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Burley, S K.]]
  </jmolCheckbox>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ifr ConSurf].
[[Category: Swaminathan, S.]]
<div style="clear:both"></div>
[[Category: Zhang, Z.]]
__TOC__
[[Category: 11200h]]
</StructureSection>
[[Category: Kinase]]
[[Category: Large Structures]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Burley SK]]
[[Category: Nysgxrc]]
[[Category: Swaminathan S]]
[[Category: Protein structure initiative]]
[[Category: Zhang Z]]
[[Category: Psi-2]]
[[Category: Rhodospirillum rubrum]]
[[Category: Sgx]]
[[Category: Structural genomic]]
[[Category: Transferase]]
[[Category: Xylulose kinase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 21 17:15:01 2009''
Retrieved from "https://proteopedia.org/3ifr"